Rustbelt RNA Meeting posters

Poster abstracts

Click on a title to see the abstract, on a header to sort by the respective column, or here for all abstracts.

Number	Presenter	Title	PI email
1	Amrita Bandyopadhyay	Insights into the plant CstF complex	aghunt00@uky.edu
65	Jessica Wohlgamuth-Benedum	The T. brucei mitochondrial desulfurase IscS is essential for tRNA thiolation: implications for tRNA editing and import	alfonzo.1@osu.edu
31	Hajeong Kim	Biochemical and thermodynamic characterization of guanosine substrate-binding of a group I Intron from bacteriophage Twort	barbgolden@purdue.edu
12	Robert Forties	A model for the flexibility of double-stranded DNA incorporating local melting	bundschuh@mps.ohio-state.edu
38	Benjamin Linger	Isolation of the tetrahymena telomeric protien complex	carolyn.price@uc.edu
13	Jordan Gladman	SMN2 exon 7 knock-in: A new spinal muscular atrophy mouse model.	chandler@ccri.net
3	Thomas Bebee	Generation of a new mouse model to help determine the therapeutic time-point for SMN replacement therapies: an update	chandler@ccri.net
16	Reeva Gupta	Missense or silent mutations in p53 exon 7 ESE result in exon skipping	chandler@ccri.net
11	Anne-Cecile Duc	Binding studies of a peptide with the A-site rRNA	csc@chem.wayne.edu
51	Keshab Rijal	A New Role for Cisplatin: Probing the Ribosome Structure	csc@chem.wayne.edu
40	Santosh Mahto	Investigation of the structural roles of nucleic acid modification in the bacterial decoding region of 16S rRNA	csc@chem.wayne.edu
4	Lana Bengez	Thermodynamic characterization of e. coli manganese superoxide dismutase binding to single- and double-stranded polynucleic acids	dmascotti@jcu.edu
41	Edward Miracco	Characterization of the products of 5-fluorouridine after the action of E. coli pseudouridine synthase TruB	eugene.mueller@louisville.edu
27	Huijue Jia	RNA duplex unwinding by the DEAD-box protein Ded1p involves multiple enzyme units that utilize ATP differentially	exj13@case.edu
22	John Hsieh	Conformational changes in B. subtilis RNase P holoenzyme associated with substrate binding measured by transient fluorescence techniques	fierke@umiche.edu
47	Daoming Qin	Characterization of 16S rRNA mutations that decrease the fidelity of translation initiation	fredrick.5@osu.edu
55	Shinichiro Shoji	Effects of antibiotics on spontaneous reverse translocation	fredrick.5@osu.edu
56	Kavleen Sikand	Activity of miRNAs in prostate carcinoma cells	g.shukla@csuohio.edu
57	Jinani Slaibi	Functional features of nuclear pre-mRNA introns containing miRNA coding regions	g.shukla@csuohio.edu
52	Jason Rozick	Functional features of nuclear pre-mRNA introns containing miRNA coding regions	g.shukla@csuohio.edu
69	Yi Shu	Application of RNA nanotechnology in gene delivery and therapy	guop@purdue.edu
14	Nicholas Green	Structural transitions of the Bacillus subtilis glyQS T box leader RNA	henkin.3@osu.edu
58	Angela Smith	Molecular basis for thiamin pyrophosphate recognition and gene regulation by the THI-box riboswitch	henkin.3@osu.edu
43	Abigael Muchenditsi	Effect of tetraloop stability on the affinity of tRNA for T box antiterminator	hinesj@ohio.edu
68	Shu Zhou	Azasugar Affinity for T Box Antiterminator Model RNA: Potential new class of RNA ligands	hinesj@ohio.edu
7	Hui-Yi Chu	Strategy to learn the function of the tRNA retrograde pathway via polysome RNAs and microarray analyses	hopper.64@osu.edu
23	Rebecca Hurto	Connections between starvation, translation, and tRNA movement?	hopper.64@osu.edu
9	Nripesh Dhungel	Why is the yeast splicing endonuclease complex located in the cytoplasm and not in the nucleus?	hopper.64@osu.edu
21	Melissa Hinman	Mammalian Hu protein family members have non-redundant functions as splicing suppressors	hua.lou@case.edu
37	Jiqiang Ling	Pathogenic mechanism of a human mitochondrial tRNAPhe mutation associated with MERRF syndrome	ibba.1@osu.edu
50	Noah Reynolds	Alternative mechanisms of determining the specificity of the genetic code in the cytoplasm and mitochondria.	ibba.1@osu.edu
19	Corinne Hausmann	An aminoacyl-tRNA synthetase:elongation factor complex for substrate channeling in archaeal translation	ibba.1@osu.edu
33	Allison Lamanna	Investigating interactions of the putative endonuclease Nob1 with 18S rRNA	kkarbst@umich.edu
60	Bethany Strunk	Characterizing the essential role of Fap7 ATPase activity in yeast ribosome assembly	kkarbst@umich.edu
63	Fulvia Terenzi	Embryonic Expression Patterns Implicate Muscleblind-like Proteins in Cardiac Morphogenesis	ladda@ccf.org
32	Kady Krivos	A comparison of two methods used to investigate peptide:RNA heteroconjugates by mass spectrometry	limbacpa@email.uc.edu
18	Michelle Hastings	Development of compounds that increase SMN2 splicing as a treatment for spinal muscular atrophy	michelle.hastings@rosalindfranklin.edu
8	Jenee Cyran	NMR Structure Predictions of Hexamer and Tetramer Oligo (C)	mserra@allegheny.edu
29	Laura Jones	Comprehensive thermodynamic parameter analysis of 3' double overhangs on terminal wobble base pairs	mserra@allegheny.edu
42	Mithun Mitra	Probing the Role of Functional Domains of HIV-1 Nucleocapsid Protein in its Nucleic Acid Chaperone Function	musier@chemistry.ohio-state.edu
28	Christopher Jones	Insights into the chaperone function of HIV-1 Gag protein	musier@chemistry.ohio-state.edu
61	Meng Sun	Investigating the Interaction between HTLV-2 Matrix and its RNA Packaging Signal	musier@chemistry.ohio-state.edu
48	Dominic Qualley	The Nucleocapsid Protein of Feline Immunodeficiency Virus is an Efficient Nucleic Acid Chaperone	musier@chemistry.ohio-state.edu
24	Michael Ignatov	tRNA-dependent Switch in Editing Mechanisms Used by Class II ProRS	musier@chemistry.ohio-state.edu
30	Besik Kankia	Differential Effects of HIV-1 NC on Strand-exchange Reactions Involving Mismatched DNA Duplexes	musier@chemistry.ohio-state.edu
59	Byung Ran So	Mechanism of Editing of Mis-charged Cys-tRNAPro by Bacterial YbaK	musier@chemistry.ohio-state.edu
5	Mario Blanco	Monitoring pre-mRNA Splicing by Single-Molecule Fluorescence Resonance Energy Transfer	nwalter@umich.edu
10	Mark Ditzler	Investigating the Physical Origin of Molecular Heterogeneity in the Hairpin Ribozyme	nwalter@umich.edu
6	Colette Castleberry	Relative Quantitation of Isotopically Labeled RNAs Using Data Dependent LC-MS/MS	pat.limbach@uc.edu
17	Daisy Hamburg	Identification of methylation sites on Thermus thermophilus ribosomal protein L11	Pat.Limbach@uc.edu
54	Susan Russell	Post-transcriptional modifications in bacterial rRNA and heat shock	pat.limbach@uc.edu
20	Laurie Heinicke	Regulation of the protein kinase PKR by perfect and defect dsRNAs	pcb@chem.psu.edu
64	Rebecca Toroney	PKR Activation by Stem-loop RNAs is 5’-Triphosphate Dependent	pcb@chem.psu.edu
35	Tek Lamichhane	Role of modified nucleotides in helix 31 of Escherichia coli 16 S ribosomal RNA	phil@biology.biosci.wayne.edu
49	Kent Redman	Expression and preliminary studies of YNL022p, a putative rRNA methyltransferase.	redman@ipfw.edu
34	Rajan Lamichhane	Single Molecule FRET to Explore Protein-RNA Interactions in the Central Domain of the 30S Ribosomal Subunit	rueda@chem.wayne.edu
67	Rui Zhao	RNA Folding Dynamics by Single Molecule Temperature Jump Kinetics	rueda@chem.wayne.edu
15	Zhuojun Guo	Single Molecule Studies of spliceosomal snRNAs U2-U6	rueda@chem.wayne.edu
46	Sudakshina Paul	Deciphering the function of G-patch proteins in Saccharomyces cerervisiae	rymond@uky.edu
2	Daipayan Banerjee	Identification and characterization of splicing factors in C. elegans	rymond@uky.edu
36	Caroline Lee	Comparison of the Catalytic Activity of Human and Yeast snRNAs	saba.valadkhan@case.edu
25	Fereshteh Jahaniani Kenari	Functional analysis of BORG, a large non coding RNA	SabaValadkhan
39	Xiaoqiang Liu	Hsp90 control of mRNA decay through stabilization of the PMR1 mRNA endonuclease	schoenberg.3@osu.edu
45	Yuichi Otsuka	Cytoplasmic capping of RNA decay intermediates	schoenberg.3@osu.edu
44	Beth Murray	Common SNP in pre-miR146a interferes with miR processing and predisposes to papillary thyroid carcinoma	schoenberg.3@osu.edu
53	Samuel Rund	Probing RNA binding by the nucleoprotein from ebolavirus	scrary@depauw.edu
26	Yasaman Jaladat	Characterization of the functional group in human U6/U2 complex	sxv46@case.edu
62	Apana Agha Takwi	The TSC1 gene is Regulation by microRNAs	yong.li@louisville.edu
66	Wei Zhang	Gene Prediction in Physarum and Didymium Mitochondria by Comparative Approach for RNA Editing	zhang.565@osu.edu