RRM
2009 Rustbelt RNA Meeting
RRM
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Agenda
| Friday, Oct 16 | |
| 11:15-12:15pm | Meeting Registration (Foyer) |
| 12:15-12:25pm | Opening Remarks - Organizers (Girish Shukla, Saba Valadkhan, David Rueda) |
| Session I: Ribosome and Translation Control (Tamara Hendrikson) | |
| 12:25-12:40pm | Title not published online - please see printed booklet Keng-Ming Chang, Tamara Hendrickson Department of Chemistry, Wayne State University |
| 12:40-12:55pm | Validating ribosomal protein L7Ae as a subunit of archaeal RNase P I-Ming Cho, Lien B. Lai, Venkat Gopalan Departments of Molecular Genetics and Biochemistry |
| 12:55-01:10pm | Identification of New Partners for Bacterial YbaK Protein In Vivo: Implications for Translational Quality Control Mom Das, Byung Ran So, Mohosin Sarkar, Thomas J. Magliery, Karin Musier-Forsyth Ohio State Biochemistry Program, The Ohio State University |
| 01:10-01:25pm | A role for the 30S subunit E site in maintenance of the translational reading frame Aishwarya Devaraj, Shinichiro Shoji, Eric D Holbrook, Kurt Fredrick Ohio State Biochemistry Program, OSU |
| 01:25-01:40pm | Dissecting the interactions between the putative endonuclease Nob1 and pre-18S rRNA Arlie Rinaldi, Allison Lamanna, Katrin Karbstein University of Michigan, Department of Chemistry |
| 01:40-01:55pm | Nonsense-mediated mRNA decapping occurs on polyribosomes Wenqian Hu, Christine Petzold, Jeff Coller, Kristian E. Baker Center for RNA Molecular Biology, Case Western Reserve University, Cleveland, OH 44106 |
| 01:55-02:10pm | tRNA celluar distribution is coordinated with P-body formation, and translation pathways. Rebecca L. Hurto, Anita K. Hopper Molecular Genetics, OSU |
| 02:10-02:25pm | Exploring potential drug target sites in the ribosome with cisplatin and its analogues Keshab Rijal and Christine S. Chow Department of Chemistry, Wayne State University |
| 02:25-02:45pm | Coffee Break |
| Session II: RNA Modification, Structure and Function (Christine Chow) | |
| 02:45-03:00pm | Evidence for a composite active site in the editing deaminase of trypanosomes Jessica Spears, Mary Anne Rubio, Juan Alfonzo Microbiology, The Ohio State University |
| 03:00-03:15pm | Title not published online - please see printed booklet Edward J. Miracco, Yizhou Xie, Junjun Chen, Shi Bai, Eugene G. Mueller University of Louisville/University of Delaware |
| 03:15-03:30pm | RNA looping by PTB: evidence using FRET and NMR spectroscopy and for a role in splicing repression Rajan Lamichhane, Gerrit M. Daubner, Judith Thomas-Crusells, Sigrid D Auweter, Cristina Manatchal, Keyunna S. Austin, Oksana Valniuk, Frdric H.-T. Allain, David Rueda Chemistry, Wayne State University |
| 03:30-03:45pm | ATP binding controls unwinding of short duplexes by the DEAD-box RNA helicase Ded1p Andrea Putnam, Quansheng Yang, Fei Liu, Eckhard Jankowsky Biochemistry, CWRU |
| 03:45-04:00pm | To Edit or not to Edit: Novel Activities and Regulation of tRNAHis Guanylyltransferase (Thg1) Bhalchandra S. Rao, Jane E. Jackman Dept of Biochemistry, The Ohio State University |
| 04:00-04:15pm | Title not published online - please see printed booklet Ryuta Takeda, Anton Petrov, Xuehua Zhong, Jesse Stombaugh, Neocles Leontis, Biao Ding Ohio State University |
| 04:15-04:45pm | Coffee Break - PIs Organizational meeting (Ball Room) |
| Session III: Regulation of RNA Processing (Michelle Hastings) | |
| 04:45-05:00pm | Splicing of the SMN genes is regulated by conserved sequence elements located in intron seven. Jordan T. Gladman, Dawn S. Chandler The Center for Childhood Cancer, The Research Institute at Nationwide Childrens Hospital and the Department of Pediatrics, The Ohio State University |
| 05:00-05:15pm | Rates of in situ transcription and splicing in large human genes Jarnail Singh, Richard A. Padgett Dept. of Molecular Genetics, Cleveland Clinic |
| 05:15-05:30pm | The Role of Hu Proteins in The Coupling of Transcription and Splicing Hua-Lin Zhou, Hua Lou Genetics Department, Case Western Reserve University |
| 05:30-05:45pm | Chemical Screens Reveal Splicing Disruption by Clinical Drugs and Differential Regulation of Constitutive Introns Ihab Younis, Michael Berg and Gideon Dreyfuss Howard Hughes Medical Institute, University of Pennsylvania, School of Medicine |
| 05:45-06:00pm | CTD fragment of prp8 enhances a snRNA catalyzed splicing reaction Yasaman Jaladat, Lingdi Zhang, Rui Zhao, Saba Valadkhan Center for RNA Molecular Biology, Case Western Reserve University |
| 06:00-06:15pm | Son is Essential for Nuclear Speckle Organization and Cell Cycle Progression Alok Sharma, Hideaki Takata, Kei-ichi Shibahara, Athanasios Bubulya, Paula A. Bubulya Biomedical Sciences Ph.D. Program, Wright State University |
| 06:15-07:15pm | Key Note Lecture I - David Lilley - How Does A Ribozyme Works |
| 07:15-08:15pm | Dinner (Upstairs in the Mezzanine) |
| Session IV: Poster Session (Ball Room and Foyer) | |
| 08:15-09:30pm | Odd Poster Present |
| 09:30-10:45pm | Even Poster Present |
| 10:45-12:30am | Evening Reception |
| Saturday, Oct 17 | |
| 07:00-08:30am | Continental Breakfast (Rafter's Restaurant with Coupon) |
| Session V: Regulatory Non-protein-coding RNAs (Hua Lou) | |
| 08:30-09:30am | Key Note Lecture II - Gordon Carmichael- Expression and function of long nuclear-retained noncoding RNAs |
| 09:30-09:45am | A nuclear-retained long non-protein coding RNA regulates SR-protein mediated alternative splicing Vidisha Tripathi, Jonathan Ellis, Supriya G. Prasanth, Benjamin J. Blencowe, K.V. Prasanth Cell and Developmental Biology, University of Illinois at Urbana-Champaign |
| 09:45-10:05am | Characterization of poly-purine-repeat containing nuclear ncRNA/s: Involvement in cell growth and differentiation. Ruiping Zheng, Vidisha Tripathi, Zhen Shen, Supriya G. Prasanth, Kannanganattu V. Prasanth CDB, University of Illinois at Urbana-Champaign |
| 10:05-10:25am | Coffee Break |
| 10:25-10:40am | Bioinformatic analysis of functional long non-protein coding RNAs Farshad Niazi, Justin Pruttivarasin, Cen Guo, Jing Li, Saba Valadkhan Center for RNA Molecular Biology, Case Western Reserve University |
| 10:40-10:55am | MYC is a Target for microRNA-33b Apana Takwi, Munish Kumar, Yong Li Biochemistry and Molecular Biology, University of Louisville |
| 10:55-11:10am | Enhanced magnitude of microRNA-mediated regulation upon muscle differentiation Yang Yu, Patricia A. Maroney, Timothy W. Nilsen RNA Center/Biochemistry, Case Western Reserve University |
| 11:10-11:25am | MicroRNAs Released From Cells Differ From the Cellular miRNA Population Lucy Pigati, Sree C. Ganapathiraju, Michelle Hastings, Steven Hearn, David Danforth, Dominik Duelli Department of Cell Biology and Anatomy, The Chicago Medical School, Rosalind Franklin University |
| 11:25-11:40am | Evaluation of specific delivery of chimeric phi29 pRNA/siRNA nanoparticles to multiple tumor cells Jing Liu, Li Li, Zhijuan Diao, Feng Xiao, Yi Shu, Peixuan Guo, Guanxin Shen Department of Biomedical Engineering, University of Cincinnati |
| 11:40-12:00pm | Coffee Break |
| Session VI: Ribotechniques and Bioinformatics (Subha Das) | |
| 12:00-12:15pm | Click Chemistry for RNA: Labeling and Ligation Eduardo Paredes, Subha R. Das Department of Chemistry, Carnegie Mellon University |
| 12:15-12:30pm | Fingerprinting of DNA and RNA using the nano-channels of bacteriophage phi29 DNA packaging nano-motor Farzin Haque, Peng Jing, Jia Geng, Chris Stites, and Peixuan Guo Biomedical Engineering, University of Cincinnati |
| 12:30-12:50pm | Division of labor between transcription elongation factors Irina Artsimovitch, Georgiy A. Belogurov Department of Microbiology and The RNA Group, The Ohio State University |
| 12:50-01:10pm | Title not published online - please see printed booklet Ralf Bundschuh, Janine Altmueller, Christian Becker, Peter Nuernberg, Jonatha Gott Departments of Physics and Biochemistry and Center for RNA Biology, Ohio State University |
| 01:10-01:40pm | Closing Remarks and Awards - 2010 Organizers (Saba Valadkhan and David Rueda) |
