RRM
2013 Rustbelt RNA Meeting
RRM
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Agenda
| Friday, Oct 18 | |
| 11:00-01:00pm | Registration and Poster set-up (odd numbered posters) |
| Session I: Ribosome Assembly and Mechanisms of Translational Control | |
| 12:45-01:00pm | Welcome and Opening remarks |
| 01:00-01:15pm | Title not published online - please see printed booklet Sandeepa M. Eswarappa, Alka Potdar, William Koch , Paul L. Fox Cellular and Molecular Medicine, Cleveland Clinic Lerner Research Institute |
| 01:15-01:30pm | Distinct functional classes of ribosomal ambiguity (ram) mutations in 16S rRNA Sean P. McClory, Aishwarya Devaraj, Kurt Fredrick Ohio State University, Dept. of Microbiology, Center for RNA Biology |
| 01:30-01:45pm | Actively translating deadenylated mRNAs in D. melanogaster S2 cells Trinh T. Tat, Patricia Maroney, Timothy W. Nilsen Center for RNA Molecular Biology-Department of Biochemistry |
| 01:45-02:00pm | HIV-1 requires two non-redundant functions of host RNA helicase A: helicase activity for mRNA translation and chaperone activity for virion replication Ioana Boeras, Kathleen Boris-Lawrie Department of Veterinary Biosciences, Center for Retrovirus Research, Center for RNA Biology, Ohio State University, Columbus Ohio, USA |
| 02:00-02:15pm | A hierarchical view of the eukaryotic large ribosomal subunit assembly line Michael Gamalinda, Uli Ohmayer, Jelena Jakovljevic, Beril Kumcuoglu, Joshua Woolford, Betty Mbom, Lawrence Lin, John L. Woolford, Jr. Dept. of Biological Sciences, Carnegie Mellon University |
| 02:15-02:30pm | Imp3 unfolds stem structures in pre-rRNA and U3 snoRNA to form a duplex essential for small subunit processing Xin Liu, Binal N. Shah, Carl C. Correll Department of BMB, Rosalind Franklin University |
| 02:30-02:45pm | A tRNA m3C methyltransferase paralog is important for ribosome biogenesis and cell division in T. brucei Ian M.C. Fleming, Zdenek Paris, Mary Anne T. Rubio, Paul J. Sample, Juan D. Alfonzo Department of Microbiology and The Center for RNA Biology, The Ohio State University |
| 02:45-03:15pm | Coffee Break |
| Session II: RNA Processing and Turnover | |
| 03:15-03:30pm | SF2/ASF Modulates Alternative Splicing of MDM2 in Cancer Daniel F. Comiskey Jr., Aishwarya G. Jacob, Ravi K. Singh, Aixa S. Tapia-Santos, Dawn S. Chandler Department of Pediatrics, The Ohio State University |
| 03:30-03:45pm | Phenotypic analysis of a mouse model of human MOPD I Faegheh Jafarifar, David E. Symer, Richard A. Padgett Molecular Genetics, Cleveland Clinic, Lerner Research Institute |
| 03:45-04:00pm | Calcium-mediated epigenetic regulation of alternative splicing in cardiomyocytes Alok Sharma, Hua Lou Department of Genetics and Genome Sciences |
| 04:00-04:15pm | SMG6 cleavage generates metastable decay intermediates from nonsense-containing β-globin mRNA Julie A. Dougherty, Roshan Mascarenhas, Daniel R. Schoenberg Molecular & Cellular Biochemistry, Ohio State University |
| 04:15-04:30pm | Title not published online - please see printed booklet Jenna Smith, Sarah Geisler, Juan Alvarez, Jeff Coller, Kristian Baker Center for RNA Molecular Biology, Case Western Reserve University |
| 04:30-04:45pm | Title not published online - please see printed booklet Nathan Raynard, Joel Hrit, Adam Petterson, Aaron Goldstrohm Department of Biological Chemistry and Genetics Training Program, University of Michigan |
| 04:45-05:00pm | Poly (A) binding protein C1 is developmentally regulated and controls a post-transcriptional pathway for cardiac hypertrophy. Sandip Chorghade, Auinash kalsotra, Michael De Lisio Biochemestry, University of Illinois, Urbana-Champaign |
| 05:00-05:20pm | PI meeting and additional time for Poster set-up |
| 05:20-06:30pm | Keynote Lecture, Dr Tom Cech, University of Colorado Boulder and HHMI |
| Saturday, Oct 19 | |
| 06:30-08:30am | Breakfast- David's Restaurant, Marriott Lobby Level |
| Session III: RNA and RNP Structure and Engineering | |
| 08:30-08:45am | SAXS-derived structure of HIV-1 genome 5´UTR reveals independently folded functional domains and three-dimensional tRNA mimicry William A. Cantara, Christopher P. Jones, Erik D. Olson, William C. Ho, Steve Tuske, Eddy Arnold, Karin Musier-Forsyth Department of Chemistry and Biochemistry, Center for Retrovirus Research, and Center for RNA Biology, The Ohio State University, Columbus OH 43210 |
| 08:45-09:00am | Evolution of Ancestral URB Protein Toward Modern U1A/U2´´ snRNP proteins. Kimberly J. Delaney, Sandra G. Williams, Mariah Lawler, Kathleen B. Hall Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine |
| 09:00-09:15am | Mod-seq: High-throughput sequencing for chemical probing of RNA structure Jason Talkish, Gemma E. May, John L. Woolford, Jr., C. Joel McManus Biological Sciences, Carnegie Mellon University |
| 09:15-09:30am | Kinetics and Thermodynamics of the Juctionless Hairpin Ribozyme Neil A. White, Charles G. Hoogstraten Biochemistry and Molecular Biology, Michigan State University |
| 09:30-09:45am | Division of labor: Separation of loading and unwinding units in an oligomer of the DEAD-box helicase Ded1p Andrea Putnam, Huijue Jia, Fei Liu, Quansheng Yang, Eckhard Jankowsky CWRU |
| 09:45-10:00am | Modulation of gene expression by inducing G-quadruplex structures in the 5'-UTR Debmalya Bhattacharyya, Kim Nguyen, Soumitra Basu Chemistry and Biochemistry, Kent State University |
| 10:00-10:15am | Three Approaches for Construction of Versatile RNA Nanoparticles for Specific Tumor Targeting Yi Shu, Farzin Haque, Dan Shu, Wei Li, Peixuan Guo Nanobiotechnology Center, Markey Cancer Center, and Department of Pharmaceutical Sciences, College of Pharmacy, University of Kentucky |
| 10:15-10:45am | Coffee Break |
| Session IV: RNA-Mediated Regulation of Gene Expression | |
| 10:45-11:00am | Lipid II-independent trans Editing of Mischarged tRNAs by the Penicillin Resistance Factor MurM Jennifer Shepherd, Michael Ibba Microbiology, The Ohio State University |
| 11:00-11:15am | The bacterial-type tRNA-independent transamidosome complex requires a novel ATPase Gayathri N. Silva, Tamara L. Hendrickson Wayne State University |
| 11:15-11:30am | eIF4H alternative splicing is regulated by the microprocessor Mallory A. Havens, Ashley A. Reich, Michelle L. Hastings Department of Cell Biology and Anatomy, Rosalind Franklin University |
| 11:30-11:45am | The Role of the Catalytically Inactive Deaminase ADR-1 in Regulating RNA Editing Michael Washburn, Boyko Kakaradov, Gene Yeo, Heather Hundley Department of Biology, Indiana University |
| 11:45-12:00pm | Investigation of Shared Molecular Recognition of Pre-tRNAs By RNA and Protein Components of RNase P Using High-Throughput Sequencing Kinetics (HTS-Kin) Courtney N. Niland, Ulf-Peter Guenter, Eckhard Jankowsky, Michael E. Harris Department of Biochemistry, Case Western Reserve University |
| 12:00-12:20pm | Identification of Neuronal Transcripts Regulated by a Nuclear Polyadenosine RNA Binding Protein Seth M. Kelly, Andreas Kuss, Anita H. Corbett, Kenneth H. Moberg Department of Biology, College of Wooster, Wooster, OH |
| 12:20-12:40pm | Molecular recognition of the SRA epigenetic regulatory lncRNA examined by NMR. Thomas Leeper, Joel Caporoso, Daniel Morris, Caroline Davis, Stephanie Bilinovich University of Akron |
| 12:40-01:00pm | Closing remarks and awards |
