Rustbelt RNA Meeting posters

Poster abstracts

Click on a title to see the abstract, on a header to sort by the respective column, or here for all abstracts.

Number	Presenter	Title	PI email
1	Wei Zhang	Prediction of nad6 in Didymium iridis using the PIE algorithm for finding edited mRNA	bundschuh@mps.ohio-state.edu
2	Robert Forties	Computational Prediction of Local Melting in Cyclized Double-Stranded DNA	bundschuh@mps.ohio-state.edu
3	Jeffrey Levengood	Rationale for the evolutionary retention of 2 unrelated LysRSs	ibba.1@osu.edu
4	Yan Chen	The Sites of Endonuclease Cleavage within Nonsense-Containing Beta-Globin mRNA are not determined by the Location of the Premature Termination Codon	schoenberg.3@osu.edu
5	Junjun Chen	The Molecular Recognition of RNA by the Pseudouridine Synthase RluA: Kinetic and Crystallographic Studies	emueller@UDel.Edu
6	Amy Graham	Dynamic Form and Function of Exosome Subunit Complexes during Mitosis and Cytokinesis	exa32@case.edu
7	Jessica Spears	Widespread tRNA Editing in Trypanosomatids	Alfonzo.1@osu.edu
8	Rajaneesh Anupam	Binding of Small Molecules to T Box Antiterminator Model	Dr.JenniferHines
9	Frank Ragone	A Single Enzyme is Required for Both C to U and A to I Deamination Editing	alfonzo.1@osu.edu
10	Sarah Walker	Characterization of ribosomes containing substitutions of E-site 23S rRNA nucleotide C2394	fredrick.5@osu.edu
11	Lance Rider	Understanding the Dihydrouridine Synthase from T. maritima	brupalf@umich.edu
12	Yanglong Zhu	Metagenomic analysis of a noncoding RNA	yong.li@louisville.edu
13	Andrea Ladd	CUG-BP1 and MBNL1 may developmentally regulate alternative splicing transitions during embryonic cardiac morphogenesis	ladda@ccf.org
14	Enrico Caserta	Mutational Analysis of the Bacillus subtilis glyQS T Box Gene	henkin.3@osu.edu
15	Lavanya Dampanaboina	Role of the 50 KD subunit of Cleavage Stimulation Factor in Polyadenylation in plants	aghunt00@uky.edu
16	Akwasi Agyeman	The effect of conserved sequence variation on the binding of the antiterminator element to tRNA	hinesj@ohio.edu
17	John Means	Fluorescence and NMR Structural Studies of the Bacillus subtilis T Box Antiterminator/tRNA Model Complex	hinesj@ohio.edu
18	Sunaina Yadav	Investigating the role of Mpp10p in ribosome biogenesis	carl.correll@rosalindfranklin.edu
19	Leonard Buller	Ribosome binding and translation within the untranslated leader of the Escherichia coli aroL gene	janssegr@muohio.edu
20	Daoming Qin	Characterization of 16S rRNA mutations that decrease the fidelity of translation initiation	fredrick.5@osu.edu
21	Karen Jack	In vitro Analysis of Mg²⁺ Interactions within the T Box Transcription Regulatory Mechanism	hinesj@ohio.edu
22	Andrew Stelzer	Stereoviews of RNA by Inverse Domain Elongation	hashimi@umich.edu
23	Qi Zhang	Elongated RNA (E-RNA): A New Approach to Study RNA Structural Dynamics	hashimi@umich.edu
24	Elizabeth Dethoff	NMR Studies of the Structural Dynamics of Wild-Type TAR RNA	hashimi@umich.edu
25	Lana Bengez	Preferential Binding of Manganese Superoxide Dismutase to Single-stranded Nucleic Acids	dmascotti@jcu.edu
26	Charles Fisher	Conformational Dynamics of HIV-2 TAR by NMR	hashimi@umich.edu
27	Maximillian Bailor	Combination of Chemical Shift and Residual Dipolar Coupling Perturbations Reveals Structural Differences Among Related Aminoglycosides Bound to the Same RNA Target	hashimi@umich.edu
28	Mahmud Hossain	Detection of Mitochondrial Transfer RNAs Import of Saccharomyces cerevisiae by their Signature Digestion Products	pat.limbach@uc.edu
29	Catherine Musselman	Impact of Static and Dynamic A-form Heterogeneity on the Determination of RNA Global	hashimi@umich.edu
30	Rajan Lamichhane	Probing the Mechanism of Alternative Splicing Regulation by PTB using Fluorescence Resonance Energy Transfer	rueda@chem.wayne.edu
31	Gabrielle Todd	NMR Characterization of Neomycin Binding to HIV-1 SL-1 RNA	hashimi@umich.edu
32	Abigael Muchenditsi	The effect of pH on T box antiterminator structure and affinity for microhelix model tRNA	hinesj@ohio.edu
33	Susan Russell	Post-transcriptional modifications in bacterial rRNA and heat shock	pat.limbach@uc.edu
34	Hajeong Kim	Biochemical and thermodynamic characterization of guanosine substrate-binding of a group I Intron from bacteriophage Twort	barbgolden@purdue.edu
35	Tek Lamichhane	Analysis of modification at 966 and 967 positions in Escherichia coli 16 S ribosomal RNA	phil@biology.biosci.wayne.edu
36	Daniel Coughlin	Prediction and Detection of Mouse tRNA Genes	dcoughli@umich.edu
37	Jay Brock	Interactions Between Leaderless mRNA and Escherichia coli Ribosomes During Translation Initiation	janssegr@muohio.edu
38	Jacqueline Giliberti	Effect of Initiation Factors on Leaderless mRNA Binding to Escherichia coli Ribosomes	janssegr@muohio.edu
39	Karthik Krishnan	Initiator tRNA-dependent and -independent interactions of Streptomyces lividans ribosomes with leaderless aph mRNA	janssegr@muohio.edu
40	Mike Marvin	Investigating Substrate Interactions of Yeast Nuclear RNase P	engelke@umich.edu
41	Krishanthi Karunatilaka	Development of an RNA Aptamer Based Purification Method for Fluorophore Labeled Proteins	rueda@chem.wayne.edu
42	Santosh Mahto	A study of the roles of modified nucleosides in the E. coli 16S ribosomal RNA decoding region	csc@chem.wayne.edu
43	Zhuojun Guo	Single Molecule Spectroscopy of the U2-U6 spliceosomal snRNAs Reveals Key Mg2+ Dependent Folding Dynamics	rueda@chem.wayne.edu
44	Daisy Hamburg	Probing the Topography of Ribonucleoprotein Complexes Using Limited Proteolysis and Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry	Pat.Limbach@uc.edu
45	Ruqiang Xu	Developmental Effects of Cleavage and Polyadenylation Specificity Factor in Arabidopsis	liq@muohio.edu
46	Denghui Xing	Genetic and Biochemical Analysis of AtClps, Arabidopsis Orthologues of Polyadenylation Factor Clp1P	Liq@muohio.edu
47	Anita Durairaj	Identifying pseudouridines in RNA by mass spectrometry	Pat.Limbach@uc.edu
48	Anne-Cecile Duc	Targeting the A-site rRNA with peptides	csc@chem.wayne.edu
49	John Hsieh	Conformational Change in the B. subtilis RNase P Holoenzyme•pre-tRNA Complex is Induced by Binding of a High-affinity Inner-sphere Divalent Ion	fierke@umich.edu
50	Daina Zeng	Kinetic Characterization of Mature tRNA Release from B. subtilis RNase P Holoenzyme by using 3’ and 5’ end Fluorescein labeled pre-tRNA by Fluorescence Stopped-Flow Techniques	fierke@umich.edu
51	Colette Castleberry	Quantitation of Isotopically Labeled RNA Using LC-MS	pat.limbach@uc.edu
52	Daniel L Kiss	Probing the structure and function of exosome subunit subcomplexes in vivo	erik.andrulis@case.edu
53	Paula Bubulya	Dynamics and Cellular Functions of Btf	paula.bubulya@wright.edu
54	Thomas Bebee	Generation of a new mouse model to help determine the therapeutic time-point for SMN replacement therapies	chandler@ccri.net
55	Caroline Vizthum	The Adduct between RluA and 5-Fluorouridine in RNA: Is it Covalent (or Just Really Tight)?	emueller@udel.edu
56	Ross Wilson	Structural Studies of Archaeal RNase P	foster.281@osu.edu
57	Abul Arif	Two-site Serine Phosphorylation of Glutamyl-prolyl tRNA Synthetase Regulates the Formation of the GAIT Translational Silencing Complex	foxp@ccf.org