RRM
2006
Rustbelt RNA Meeting
RRM
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Agenda
| Friday, Oct 20 | |
| 12:00-01:00pm | Meeting Registration (Foyer) |
| 01:00-01:10pm | Opening Remarks |
| Session I: RNA motifs | |
| 01:10-01:30pm | The Smk box riboswitch in Lactobacillales Ryan T. Fuchs, Frank J. Grundy, Tina M. Henkin Department of Microbiology, The Ohio State University |
| 01:30-01:50pm | In vivo and in vitro studies of a SAM-binding riboswitch Jerneja Tomsic, Frank J. Grundy, Brooke A. McDaniel, Tina M. Henkin Department of Microbiology, The Ohio State University |
| 01:50-02:10pm | Generating New Specific RNA Interaction Interfaces Using C-loops Kirill A. Afonin, Neocles B. Leontis Department of Chemistry, BGSU |
| 02:10-02:30pm | FR3D: A Tool for Finding, Scoring and Clustering 3D Recurrent RNA Motifs Jesse Stombaugh, Craig L. Zirbel, Neocles. B. Leontis Department of Biological Sciences, Bowling Green State University |
| 02:30-02:50pm | Coffee Break (short PI meeting in auditorium) |
| Session II: Regulation - Part 1 | |
| 02:50-03:10pm | A Kinase-Dependent, Negative Feedback Mechanism in GAIT-Mediated Translational Silencing Rupak Mukhopadhyay, Paul L. Fox Department of Cell Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195 |
| 03:10-03:30pm | The Origin and Evolution of an mRNA-binding Domain in Glutamyl-prolyl tRNA Synthetase Partho Sarothi Ray, Paul L. Fox Dept. of Cell Biology, Lerner Research Institute, Cleveland Clinic |
| 03:30-06:00pm | Poster Session |
| 03:40-04:50pm | odd numbers present |
| 04:50-06:00pm | even numbers present |
| 06:00-07:00pm | Dinner (Upstairs in the Mezzanine) |
| Session III: Regulation - Part 2 | |
| 07:10-07:30pm | Novel Connection Between Inorganic Phosphate Availability and tRNA Nucleus-cytosol Dynamics Rebecca Hurto, Amy Tong, Charlie Boone, Anita K Hopper Molecular Genetics, OSU |
| 07:30-07:50pm | Characteristics of the Arabidopsis ortholog of CPSF30 Balasubrahmanyam Addepalli, Arthur G. Hunt Plant and Soil Sciences, University of Kentucky |
| 07:50-08:10pm | c-Src Kinase Activates the Targeting of Pmr1 to Polysomes and Endonuclease-Mediated mRNA Decay Yong Peng, Daniel R. Schoenberg Molecular and Cellular Biochemistry, Ohio State University |
| 08:10-08:30pm | Alternative splicing of p53 modulators MDM2 and MDM4 in response to cytotoxic stress Ravi K. Singh, Edward Xie, Jaquelyn Bitler, Dawn Chandler Molecular, Cellular and Developmental Biology program MCDB, The Ohio State University, Columbus, OH. |
| 08:30-08:50pm | Coffee Break |
| Session IV: tRNA | |
| 08:50-09:10pm | Functional association between three archaeal aminoacyl-tRNA synthetases Corinne Hausmann, Mette Praetorius-Ibba, Molly Paras, Mike Ibba Department of Microbiology, The Ohio State University |
| 09:10-09:30pm | Mechanism of tRNA-dependent editing in translational quality control Jiqiang Ling, Hervé Roy, Michael Ibba Microbiology Department, the Ohio State University |
| 09:30-09:50pm | Mitochondrial Import of tRNA: an evolutionarily conserved pathway from yeast to humans Mary Anne T. Rubio, Jesse Rinehart, Dieter Soll, Juan D. Alfonzo Microbiology, The Ohio State University |
| 09:50-10:10pm | Evidence that substrate specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P Lei Sun, Frank E. Campbell, Nathan H. Zahler, Michael E. Harris Center for RNA Molecular Biology and Department of Biochemistry, Case Western Reserve University |
| 10:10-10:20pm | Presentation of the Poster Awards |
| 10:20-12:00am | Evening Reception (Central Lobby Area) All PIs - please stay in the auditorium for the RRM07 planning meeting |
| Saturday, Oct 21 | |
| 07:45-08:20am | Continental Breakfast (Rafter's Restaurant with Coupon) |
| Session V: Ribosomes | |
| 08:20-08:40am | Reverse translocation of tRNA in the ribosome Shinichiro Shoji, Sarah Walker, Kurt Fredrick Department of Microbiology, The Ohio State University |
| 08:40-09:00am | Mechanistic insights into RNA chaperone activities that are essential for ribosome biogenesis Timea Gerczei, Carl C Correll Department of Biochemistry and Molecular Biology, Rosalind Franklin University |
| 09:00-09:20am | Protein-RNA Interactions in the Central Domain of 30 S ribosomal subunit Kris A. Baker, James R. Williamson, Philip R. Cunningham Department of Biological Sciences, Wayne State University |
| 09:20-09:40am | Functional Analysis of the Helix 23b Internal Loop in 16S Ribosomal RNA. Chandani Kodikara, John SataLucia, Phil Cunningham Chemistry Department, Wayne state University |
| 09:40-10:00am | Studies on pH Dependence of the Escherichia coli 23 S rRNA Helix 69 Structure Sanjaya C. Abeysirigunawardena, Christine S. Chow Department of Chemistry, Wayne State University |
| 10:00-10:20am | Coffee Break |
| Session VI: RNA Structure | |
| 10:20-10:40am | Detecting Motional Modes of Elongated RNA using C-13 Relaxation Alexandar L Hansen, Hashim M Al-Hashimi Chemistry, University of Michigan |
| 10:40-11:00am | NMR Characterization of Mg2+ Dependent Structural Plasticity in the Bulge Xiaoyan Sun, Qi Zhang, Hashim M. Al-Hashimi Department of Chemistry & Biophysics Research Division, University of Michigan |
| 11:00-11:20am | Selection and Cocrystallization of FAB-P4P6 Complex: towards Chaperone-Assisted RNA Crystallography Jingdong Ye, Valentina Tereshko, John K. Frederiksen, Joseph A. Piccirilli HHMI, Department of Biochemistry and Molecular Biology |
| 11:20-11:40am | Deciphering RNA Structural Diversity and Systematic Phylogeny from Microbial Metagenomes Yong Li biochemistry and molecular biology |
| 11:40-12:00pm | Role of Viral RNA as an Assembly Platform for the Tombusvirus Replicase Complex Peter Nagy, Judit Pogany, Kunj Pathak Plant Pathology, University of Kentucky |
| 12:00-12:20pm | Closing Remarks and the Presentation of the Oral Awards |
