Agenda
Friday, Oct 26
| Time | Event |
|---|---|
| 08:30-05:00pm | Registration Foyer 2nd floor |
| 09:00-12:00pm | Workshop 1 — RNA structure visualization and analysis Meeting Room 34 |
| 09:01-12:00pm | Workshop 2 — Graduate school applications Meeting Room 35 |
| 01:00-01:15pm | Welcome and opening remarks Hayes Ballroom CDE All Oral Sessions will be held in Hayes Ballroom CDE |
Session I: RNA Shape, Structure and RecognitionChair: Jessica Brown | |
| 01:15-01:30pm | In vivo RNA structural probing of uracil and guanine base pairing by 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC) David Mitchell III, Andrew J. Renda, Catherine A. Douds, Paul Babitzke, Sarah M. Assmann, Philip C. Bevilacqua Department of Chemistry, Penn State University |
| 01:30-01:45pm | Maximizing quantitative structural information from high-throughput RNA structure probing Molly E. Evans, Angela M Yu, Petr Sulc, Julius B. Lucks Department of Chemical and Biological Engineering, Northwestern University |
| 01:45-02:00pm | Title not published online - please see printed booklet Jane K Frandsen, Anna V. Sherwood, Frank J. Grundy, Tina M. Henkin Ohio State Biochemistry Program, Center for RNA Biology, The Ohio State University |
| 02:00-02:15pm | KIN-CLIP: transcriptome-wide kinetics for RNA-protein interactions in cells Deepak Sharma, Leah Zagore, Matthew Brister, Carlos Crespo Hernandez, Donny Licatalosi, Eckhard Jankowsky Center for RNA Science and Therapeutics, School of Medicine, Case Western Reserve University, Cleveland, OH 44106 |
| 02:15-02:30pm | Title not published online - please see printed booklet Audrey C. Kehling, Mi Seul Park, Alison E. Hager, Kotaro Nakanishi Department of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, USA |
| 02:30-02:45pm | Title not published online - please see printed booklet Hiba A. Al-Ashtal, Courtney M. Rubottom, Andrea J. Berman University of Pittsburgh |
| 02:45-03:15pm | Coffee break Foyer 2nd floor |
Session II: Sculpting the RNA: Processing and ModificationsChair: Douglas Bernstein | |
| 03:15-03:30pm | Accurate transcriptome-wide identification of m5C RNA modification events at single molecule resolution from direct RNA sequencing of human cell lines Raja Shekar Varma Kadumuri, Mir Quoseena, Sarath Chandra Janga Department of BioHealth Informatics, School of Informatics and Computing, Indiana University Purdue University |
| 03:30-03:45pm | DNA methylation regulates mRNA alternative cleavage and polyadenylation Vishal Nanavaty, Changjing Hong, Elizabeth Abrash, Jeffrey M. Bhasin, Thomas J. Sweet , Tae Hyun Hwang, Angela H. Ting Genomic Medicine Institute, Lerner Research Institute, Cleveland Clinic |
| 03:45-04:00pm | The association of tRNA intron accumulation with environmental stress conditions Lauren Peltier, Alicia Bao, Anita Hopper Molecular Genetics, The Ohio State University |
| 04:00-04:15pm | An orphan 3’-5’ polymerase implicated in noncoding RNA processing Samantha Dodbele, Blythe Moreland , Yicheng Long, Ralf Bundschuh, Jane Jackman Ohio State Biochemistry Program, The Ohio State University OSU; Center for RNA Biology, OSU |
| 04:15-04:30pm | Maturation of Drosophila intronic-RNase P RNA (RPR) critically depends on association with its protein subunits Geeta Palsule, Venkat Gopalan, Amanda Simcox Department of Molecular Genetics, The Ohio State University |
| 04:30-05:00pm | Poster Set up / PI Meeting |
| 05:00-06:00pm | Keynote Lecture — Dr Tom Cooper "RNA processing impacts disease through multiple mechanisms" |
| 06:15-07:45pm | Dinner Hayes Ballroom AB |
| 07:45-09:15pm | Poster session (odd number posters judged) Foyer 2nd floor |
| 09:00-12:00am | Cocktails and Reception Foyer 2nd floor |
| 09:30-11:00pm | Poster session (even number posters judged) Foyer 2nd floor |
Saturday, Oct 27
| Time | Event |
|---|---|
Session III: Ribosome Assembly and Mechanisms of Translational ControlChair: Angie Hilliker | |
| 08:45-09:00am | Final maturation stages of the polypeptide exit tunnel Daniel Wilson, Amber LaPeruta, John L. Woolford Biological Sciences Carnegie Mellon University |
| 09:00-09:15am | Quantitative analysis of yeast Kozak variants for AUG and near-AUG start codons using a massively parallel reporter assay Christina Akirtava, Hunter Kready, Lauren Nazzaro, Gemma E. May, C. Joel McManus Biological Sciences at Carnegie Mellon University |
| 09:15-09:30am | Discovery and characterization of peptide inhibitors of RsmC function Davidnhan To, Keshav GC, Dr. Sanjaya Abeysirigunawardena Department of Chemistry and Biochemistry, Kent State University |
| 09:30-09:45am | Rusty ribosomes: how oxidation damages rRNA and affects translation Jessica Willi, Norbert Polacek, Pat A. Limbach Department of Chemistry and Biochemistry, University of Bern |
| 09:45-10:00am | Pseudouridylation of mRNA can alter translation elongation, fidelity and termination Monika Franco, Daniel Eyler, Kristin Koutmou Program in Chemical Biology, University of Michigan |
| 10:00-10:15am | Ribosome binding by yeast eIF4B drives stress-induced changes in translation Xiaozhuo LIU, Houtan Moshiri, Sarah E. Walker Department of Biological Sciences, The State University of New York at Buffalo |
| 10:15-10:30am | MiR-574-FAM210A axis maintains cardiac mitochondrial translational homeostasis Jiangbin Wu, Kadiam C Venkata Subbaiah, Feng Jiang, , Omar Hedaya, Wai Hong Wilson Tang, Peng Yao Aab Cardiovascular Research Institute, Department of Medicine, University of Rochester School of Medicine & Dentistry, Rochester, NY 14586 |
| 10:30-11:00am | Coffee break Foyer 2nd floor |
Session IV: RNA in Health and DiseaseChair: Kausik Chakrabarti | |
| 11:00-11:15am | MIR100 host gene-encoded lncRNAs regulate cell cycle by modulating the interaction between HuR and its target mRNAs Qinyu Sun, Vidisha Tripathi, Deepak Singh, Qinyu Hao, Supriya G. Prasanth, Je-Hyun Yoon, Kyung-Won Min, Sylvia Davila, Richard W. Zealy, , Xiao Ling Li, Ashish Lal, Elin Lehrmann, Yongqing Zhang, Kevin G. Becker, Myriam Gorospe, Susan M. Freier, Kannanganattu Prasanth Department of Cell and Developmental Biology, University of Illinois at Urbana-Champaign |
| 11:15-11:30am | Dynamic regulation of alternative splicing of neurofibromatosis type 1 exon 23a in the mouse brain Xuan Guo, Hua Lou Department of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH, 44106 |
| 11:30-11:45am | LUC7L2 is a splicing regulatory protein that is frequently mutated in bone marrow neoplasms Hershberger C.E., Gu, X., Dietrich, R.C., Hiznay J., Hosono N., Makishima, H. , Saunthararajah, Y., Maciejewski J. , Padgett R.A. Cleveland Clinic Foundation, Cleveland, OH |
| 11:45-12:00pm | Overexpression of a non-muscle RBFOX2 splice isoform induces cardiac arrhythmias in Myotonic Dystrophy Chaitali Misra, Sushant Bangru, Darren J. Parker, Sara Koenig, Ellen Lubbers, Peter Mohler, Jamila Hedhli, Wawrzyniec L. Dobrucki, Thomas A. Cooper, Auinash Kalsotra Department of Biochemistry, University of Illinois, Urbana-Champaign, IL |
| 12:00-12:15pm | DDX3X Modulates CGG-Associated RAN Translation and Neuronal Toxicity Alexander E. Linsalata, Fang He, Sam Natla, Peter K. Todd University of Michigan |
| 12:15-12:35pm | High levels of intron-containing transcripts in aggressive cancers Daniel Dominguez, Yi-Tsuan Tsai, Zefeng Wang, Christopher Burge Pharmacology, UNC Chapel Hill |
| 12:35-12:55pm | Regulation of human alternative splicing by the spliceosomal small nuclear RNAs Heidi Dvinge, Robert Bradley UW-Madison |
| 12:55-01:15pm | Awards and Closing remarks Hayes Ballroom CDE |
| 01:30-02:45pm | Career Mentoring lunch Hayes Ballroom B |