| Number |
Presenter |
Title |
PI |
| 71 | Amal Abu Almakarem
|
Structural Analysis of RNA Base Triples: Classification, Prediction, and Effects of Mutations |
Neocles B. Leontis |
| 6 | Elvin A. Aleman
|
2-Aminopurine Single-Molecule Fluorescence |
David Rueda |
| 78 | Lindsey Aurora
|
The mRNA export adaptor aly-3 is a an alternatively spliced target of the nonsense mediated decay (NMD) pathway in C. elegans |
David Markwardt |
| 44 | Jo Marie Bacusmo
|
Probing the Function of the Truncated Insertion Domain in Rhodopsudomonas palustris Prolyl-tRNA Synthetase |
Karin Musier-Forsyth |
| 13 | Victoria Barron
|
Complex control of Neurofibromatosis Type I exon 23a expression |
Hua Lou Ph.D. |
| 67 | Abhijit Basu
|
rRNA methylation plays a significant role in determining the activity of certain cellular, but not viral IRESs |
Barsanjit Mazumder |
| 14 | Tupa Basu Roy
|
Requirement of Helix 1 base-pairing between U6atac and U12 snRNA in U12-dependent pre-mRNA splicing |
Dr. Girish C Shukla |
| 43 | Thomas Bebee
|
Development of mouse models to study SMN splicing and replacement therapy |
Dr. Dawn S. Chandler Ph.D. |
| 7 | Philip Bevilacqua
|
Mechanistic considerations for general acid-base catalysis by RNA: Cooperative interaction of the acid and base can lead to rate acceleration in the absence of apparent pKa shifting |
Philip C. Bevilacqua |
| 77 | Mario Blanco
|
Single molecule FRET studies of yeast pre-mRNA splicing |
Nils Walter |
| 32 | Becky Cai
|
RNAi-mediated depletion of the long non-coding RNA BDNFOS rescues BDNF mRNA expression: implications for cis-antisense RNA regulation in epileptogenic seizure activity. |
Leonard Lipovich |
| 59 | Benli Chai
|
The Ribosomal Databse Project: Tools and sequences for rRNA analysis. |
James R. Cole |
| 10 | Cai Chen
|
Comparative sequence analysis in insertional RNA editing |
Ralf Bundschuh |
| 31 | Jie Chen
|
Alternative Polyadenylation and miRNA targets in Arabidopsis |
Jie Chen |
| 70 | Mathieu Cinier
|
Fabrication of Stable and RNase-Resistant RNA Nanoparticles Active in Gearing the Nanomotors for Viral DNA-Packaging |
Peixuan Guo |
| 2 | Lavanya Dampanaboina
|
Characterization of an Arabidopsis Orthologue of Pfs2p in 3' end processing using a tethering assay and 3’RACE. |
Dr.Arthur G Hunt |
| 46 | Kiley Dare
|
Expanding the physiological role of multiple peptide resistance factor in bacteria |
Michael Ibba |
| 38 | Romel Dator
|
Characterization of improperly folded ribosome assembly intermediates in E. coli cells |
Patrick A. Limbach |
| 12 | Varun Dewan
|
Discovery of Cyclic Peptide Inhibitors Against HIV-1 Capsid |
Karin Musier-Forsyth |
| 51 | Bill Eberley
|
Probing the multimeric structure of the human tRNAHis guanylyltransferase |
Jane Jackman |
| 5 | Bobby Gaffney
|
CPSF30 in Medicago sativa. |
Arthur Hunt |
| 81 | Arnab Ghosh
|
Truncation of Ribosomal protein S5 abrogates GCN4 expression by acting downstream of the 48S complex assembly |
Anton A. Komar |
| 37 | Suman Govindaraju
|
Transcriptional Regulation of RNA-binding protein HuR in Renal Stress and Ischemia-Reperfusion Injury |
Beth S Lee |
| 63 | Lalith Gunawardane
|
Defining the “interactome” of a long non-coding RNA |
Saba Valadkhan |
| 18 | Zhuojun Guo
|
Single Molecule Studies of spliceosomal RNAs U2 and U6 |
David Rueda |
| 19 | Andrew Guzowski
|
Endogenous Targets of miR-488* microRNA in Prostate Cancer |
Andrew Guzowski |
| 27 | Melissa Hinman
|
A novel mouse and embryonic stem cell model for studying the biological role of neurofibromatosis type 1 exon 23a alternative splicing |
Hua Lou |
| 42 | Aishwarya Jacob
|
Regulation of p53 by alternative transcripts of MDM2: An interplay between splicing regulators and DNA damage |
Dawn S Chandler |
| 66 | Faegheh Jafarifar
|
Modulation of microRNA activity by hnRNP L regulates VEGFA expression in hypoxia |
Paul L. Fox |
| 53 | Jelena Jakovljevic
|
Roles played by ribosomal proteins in ribosome assembly |
John Woolford |
| 8 | Yasaman Jaladat
|
CTD fragment of prp8 enhances a snRNA catalyzed splicing reaction |
Saba Valadkhan |
| 60 | Hui Jia
|
Phylogenetic analysis of mammalian long non-coding RNA genes. |
Leonard Lipovich |
| 73 | Dan Kellerman
|
Determining mechanisms of enzymatic and non-enzymatic catalysts of RNA 2’-O-transphosphorylation using kinetic isotope effects |
Mike Harris |
| 80 | Aaron Kim
|
Analysis of the catalytically essential interactions in protein-free snRNA-mediated splicing |
Saba Valadkhan |
| 75 | Daniel L. Kiss
|
Surveillance of mRNAs by Distinct Exozymes |
Erik D. Andrulis |
| 52 | Robert Knarr
|
Using JAVA to find secondary structure motifs in bpseq files |
Dr. Martin Serra |
| 79 | Kevin Kunzelman
|
Title not published online |
Dr. Girish Shukla |
| 17 | Rajan Lamichhane
|
Alternative Splicing Regulation Through RNA looping |
David Rueda |
| 55 | Siwei Li
|
Comparative Identification of Sequence Variation in tRNAs from Two Organisms by LC-MS |
Patrick A. Limbach |
| 45 | Wan Hsin Lim
|
Contribution of 5’ leader of the Precursor tRNA toward Recognition and Catalysis by Bacterial RNase P |
Carol A. Fierke |
| 69 | Sheng Liu
|
Biophysical studies of the anticodon binding domain of human lysyl-tRNA synthetase |
Pearl Tsang |
| 39 | Yicheng Long
|
Multiple functions of Thg1-Like Proteins (TLPs) of Dictyostelium discoideum |
Jane Jackman |
| 76 | David Markwardt
|
A microarray screen for physiologic targets of the nonsense-mediated mRNA decay (NMD) pathway in Schizosaccharomyces pombe |
David Markwardt |
| 23 | Uri Mbonye
|
Reactivation of Processive HIV proviral transcription by T cell receptor signaling |
Jonathan Karn |
| 49 | Michael McCann
|
Non-nearest-neighbor dependence of the stability for RNA group II single nucleotide bulge loops |
Dr. Martin Serra |
| 4 | Clay Mishler
|
Title not published online |
Blanton S. Tolbert |
| 82 | Farshad Niazi
|
Analysis of the features of functional long non-coding RNAs |
Saba Valadkhan |
| 61 | Patrick Ochieng
|
Understanding Dynamics-Function Relationship in the Hairpin Ribozyme |
Dr Charles Hoogstraten |
| 9 | Eduardo Paredes
|
Solid-phase synthesis of branched RNA |
Subha R. Das |
| 3 | Deepak Patil
|
Identifying targets of cytoplasmic capping |
Daniel R. Schoenberg |
| 68 | Amy Pitstick
|
Nuclear reorganization of RNA processing machinery during muscle cell differentiation |
Paula A. Bubulya |
| 34 | Chaucola Pleasant
|
Testing the Efficacy of Small Nuclear snRNAs in Splicing Interference |
Girish C. Shukla |
| 22 | Bhalchandra Rao
|
Title not published online |
Jane E. Jackman |
| 58 | Kent Redman
|
Investigation of Dual Cysteine RNA Methyltransferases as Acid Sensors |
Kent L. Redman |
| 54 | Theresa Rogers
|
A pseudo-tRNA modulates antibiotic resistance in Bacillus cereus |
Michael Ibba |
| 35 | Matthew Rouhier
|
Use of fluorescent mini-genes to identify regulators of MDM2 alternative splicing |
Dawn S. Chandler |
| 74 | Miriam Ruiz
|
Distinct effects of exosome subunit depletion on hsp70 and hsp26 mRNA levels upon recovery from heat shock |
Erik D. Andrulis |
| 56 | Tiffiny Rye-McCurdy
|
Nucleic Acid Chaperone Activity of Rous Sarcoma Virus Nucleocapsid and Gag Proteins |
Karin Musier-Forsyth |
| 72 | Mridusmita Saikia
|
Exploring tRNA cleavage as the mechanism of translational repression in response to osmotic stress |
Dr. Maria Hatzoglou |
| 24 | Benjamin Sauerwine
|
Bioinformatic and Deep Sequencing Study of Small RNAs in Malaria |
Michael Widom |
| 83 | Susan Schroeder
|
NMR structure of prohead RNA E-Loop hairpin |
Susan J. Schroeder |
| 25 | Brianne Shane
|
Role of coupled motions in the catalytic activity of E. coli bacterial prolyl-tRNA synthetases |
Karin Musier-Forsyth |
| 47 | Alok Sharma
|
Alternative splicing of a subset of human genes is regulated by Son |
Paula A. Bubulya |
| 29 | Kavleen Sikand
|
Targeting androgen receptor by Andro-miRs in prostate cancer |
Girish C. Shukla |
| 15 | Jagjit Singh
|
Evidence that the 5’ Splice Site mutations of a MicroRNA Coding Intron modulate the target mRNA expression. |
Dr. Girish C. Shukla |
| 26 | Amanda Solem
|
Title not published online |
David Rueda |
| 1 | Jessica Spears
|
Trypanosoma brucei ADAT2/3 tRNA deaminase: Conserved active site residues, unique active site architecture |
Juan D. Alfonzo |
| 40 | Bill Swinehart
|
tRNA substrate recognition by the yeast m1G9 methyltransferase Trm10 |
Jane Jackman |
| 21 | Ryuta Takeda
|
Loop 6 of Potato spindle tuber viroid is an essential RNA structural motif regulating RNA inter-cellular trafficking |
Biao Ding |
| 41 | Jason Talkish
|
Does the DEAD-box protein Drs1 drive the chronology of ribosome assembly? |
John L. Woolford Jr. |
| 48 | Aixa S. Tapia-Santos
|
Generation of an MDM2-ALT1 mouse model to determine its role in cancer. |
Dr. Dawn S. Chandler |
| 33 | Keshia Torres-Munoz
|
Son is important for cell cycle progression |
Paula A. Bubulya |
| 28 | Oscar Vargas
|
In vitro characterization of two free-standing homologs of the bacterial prolyl-tRNA synthetase editing domain in Caulobacter crescentus |
Karin Musier-Forsyth |
| 50 | Sapna Varia
|
High resolution imaging of Btf and TRAP150 at gene locus in situ. |
Paula Bubulya |
| 11 | Ying Wang
|
Title not published online |
Biao Ding |
| 30 | Collin Wetzel
|
Identification and sequencing of transfer ribonucleic acid (tRNA) signature digestion products through the use of high pressure liquid chromatography (HPLC) and Ultra-high pressure Liquid chromatography (UPLC) coupled to an ion trap mass spectrometer |
Collin Wetzel |
| 62 | Marcus Wood
|
Single-molecule studies of TRAP-RNA binding |
David Rueda |
| 64 | Denghui Xing
|
Polyadenylation Factor PCFS4 functions in Arabidopsis development by regulating both transcription and mRNA processing of a subset of genes |
Q. Quinn Li |
| 65 | Peng Yao
|
Alternative polyadenylation in EPRS coding region generates a truncated protein that maintains a “translational trickle” from GAIT target mRNAs |
Paul Fox |
| 57 | Paul Yourik
|
Kinetic analysis of templated and non-templated nucleotide addition by trnahis guanylyltransferase |
Jane Jackman |
| 36 | Rosanna Yuen
|
Targeting Plasmodium Telomerase RNA by Peptide Nucleic Acids (PNAs) |
Kausik Chakrabarti |
| 16 | Yanyan Zhang
|
Identification of X chromosome inactivation specific transcript (Xist) interacting proteins in vivo |
Thomas Leeper |
| 20 | Rui Zhao
|
Laser-asisted single-molecule refolding |
David Rueda |
