| Number |
Presenter |
Title |
PI |
| 15 | Alice Deckert
|
A kinetic approach to the mechanism for nucleic acid renaturation |
Alice A. Deckert |
| 21 | Kate Ehrensberger
|
Zinc-dependent regulation of a natural antisense transcript |
Amanda J. Bird |
| 2 | Yotam Blech-Hermoni
|
Model systems for the investigation of CELF1 involvement in early heart development |
Andrea N Ladd |
| 12 | Twishasri Dasgupta
|
Gene expression analyses of MHC-CELFΔ mice implicate CELF-mediated alternative splicing in contractile gene regulation |
Andrea N. Ladd |
| 51 | Liuyin Ma
|
The role of polyadenylation in seed germination |
Arthur G. Hunt |
| 25 | Bobby Gaffney
|
Title not published online |
Arthur Hunt |
| 62 | Woong June Park
|
Microinjection as a tool for studying the mechanism of nuclear import of Potato spindle tuber viroid (PSTVd) |
Biao Ding |
| 68 | Prashant Rajan
|
A thermodynamic study of HIV splicing factors |
Blanton S. Tolbert |
| 70 | Carrie Rollins
|
A Structural and Thermodynamic Study of Alternative Splicing of the HIV Genome |
Blanton S. Tolbert |
| 56 | Grace Miner
|
NMR and thermodynamic studies of the human oncogenic microRNA, human miR-34c |
Blanton S. Tolbert |
| 55 | Charles Medert
|
Characterization of hairpin elements in the HIV splice site A7 through isotopic segmental labeling |
Blanton S. Tolbert |
| 42 | Jeff Levengood
|
RRM recognition of HIV-1 splice site A7 |
Blanton Tolbert |
| 48 | Xin Liu
|
Investigating the function of a candidate pre-rRNA processing endonuclease |
Carl C. Correll |
| 36 | Pakoyo F Kamba
|
RNA binding by the 26.9 kDa Trypanosoma brucei pentatricopeptide repeat protein: insights from deletion mutagenesis and in vitro selection. |
Charles G. Hoogstraten |
| 11 | Chuck Daniels
|
The tRNA intron endonuclease from the haloarchaeal organism, Haloferax volcanii, plays a broad role in RNA metabolism. |
Charles J. Daniels |
| 78 | Christopher Strulson
|
RNA Function Through Compartmentalization |
Christine D. Keating Philip C. Bevilacqua |
| 93 | Zhixin Zhao
|
Comparative analysis of polyadenylation signal variations during evolution in eukaryotes |
Chun Liang |
| 18 | Min Dong
|
Title not published online |
Chun Liang |
| 67 | Praveen Kumar Raj Kumar
|
In-silico exploration of alternatively spliced introns in Chlamydomonas reinhardtii |
Chun Liang |
| 73 | Emily Schmidt
|
PeanutDB: integrated bioinformatics web portal for Arachis hypogaea transcriptomics |
Chun Liang |
| 19 | Julie Dougherty
|
A sensitive assay for quantifying full-length and endonucleolytic decay products of nonsense-containing β-globin mRNA |
Daniel R Schoenberg |
| 58 | Chandrama Mukherjee
|
Physical separation of capped and uncapped RNA using recombinant eIF4E-eIF4G resin |
Daniel R Schoenberg |
| 72 | Juan Santiago-Torres
|
WITHDRAWN |
Daniel R. Schoenberg |
| 53 | Roshan Mascarenhas
|
Precursor-product relationship in the erythroid cell-specific decay of nonsense-containing β-globin mRNA |
Daniel R. Schoenberg |
| 7 | Stephanie Clack
|
Comparison of Transcription using Short Single, Double, and Snapback DNA Templates |
David P. Mascotti |
| 43 | Elizabeth Lewis
|
Interactions of Human Superoxide Dismutase 2 with RNA |
David P. Mascotti |
| 64 | Bishnu Paudel
|
Characterize thermodynamics and kinetics aspects of the structural heterogeneity in the c-di-GMP riboswitch through laser assisted single molecule refolding |
David Rueda |
| 59 | Hansini Mundigala
|
Single-Molecule Studies of HIV-1 Dimerization Initiation Sequence Kissing Interaction and its Resolution to a Stable Extended Duplex |
David Rueda |
| 87 | Chandani Warnasooriya
|
Single molecule studies of Prp24-dependent folding dynamics of the U2/U6 complex |
David Rueda |
| 89 | Sharla Wood
|
Single molecule studies of the c-di-GMP riboswitch |
David Rueda |
| 33 | Aishwarya Jacob
|
Conserved cis elements and modified trans factors dictate MDM2 alternative splicing |
Dawn S Chandler |
| 17 | Catherine Dominguez
|
Modulation of Splicing Events to Achieve an Intermediate Mouse Model |
Dawn S. Chandler |
| 8 | Daniel Comiskey
|
SC35 and SF2/ASF Regulate Stress-Responsive Alternative Splicing of MDM2 |
Dawn S. Chandler |
| 39 | Brent Kochert
|
Biophysical characterization of ASF/SF2's interaction with splice site A7 in the HIV genome |
Dr. Blanton S. Tolbert |
| 65 | Chaucola Pleasant
|
Splicing Interference (SPLICEi) By Small Nuclear RNAs in Breast Cancer |
Dr. Girish Shukla Ph.D. |
| 50 | Yicheng Long
|
Multiple functions of Thg1-like proteins in Dictyostelium discoideum |
Dr. Jane E. Jackman |
| 54 | Liz McMichael
|
Use of 2-Aminopurine to detect positional ambiguity in group II single- nucleotide bulge loops |
Dr. Martin J. Serra |
| 80 | Blake Sweeney
|
The role of non Watson Crick base pairs in recurrent 3D motifs in the small subunit of extremophilic ribosomes |
Dr. Neocles B. Leontis |
| 84 | Keshia Torres-Munoz
|
Son is Important for Cell Cycle Progression |
Dr. Paula A.Bubulya |
| 85 | Sapna Varia
|
Btf and TRAP150 colocalize with splicing factors and exon junction complex proteins at a gene locus in situ |
Dr. Paula Bubulya |
| 10 | Lavanya Dampanaboina
|
Characterization of FY, an orthologue of yeast 3’ end processing factor Pfs2p, in plant polyadenylation using tethering assay and 3’ RACE. |
Dr.Arthur G Hunt |
| 60 | Luyen Nguyen
|
Title not published online |
Elizabeth J. Tran |
| 86 | Govardhan reddy Veerareddygari
|
The initial steady state kinetic characterization of a thermophilic pseudouridine synthase (Thermotoga maritima TruB) |
Eugene G. Mueller |
| 75 | Jagjit Singh
|
Splice site mutations alters the expression of intronic miRNA |
Girish C Shukla |
| 20 | Jey Sabith Ebron
|
3′ UTR context dependent differential expression of miRNA targeted genes |
Girish C. Shukla |
| 30 | Lauren Hammell
|
Thermodynamic analysis of the ATP binding pocket for a bacterial DEAD-box protein |
Ivelitza Garcia |
| 27 | Sushmita Ghosh
|
A novel role for full-length dADAR in 5'-UTR intron splicing regulation of rnp-4f pre-mRNA during Drosophila embryogenesis |
Jack Vaughn |
| 9 | John Cook
|
Non-catalytic embryonic dADAR isoform is evolutionarily-conserved in Drosophila but not translated into protein during embryogenesis |
Jack Vaughn |
| 5 | Benli Chai
|
The Ribosomal Databse Project: Tools and sequences for rRNA analysis. |
James R. Cole |
| 57 | Fuad Mohammad
|
A role for 3’-5’ polymerization in tRNA editing |
Jane E. Jackman |
| 69 | Bhalchandra Rao
|
Title not published online |
Jane E. Jackman |
| 63 | Krishna Patel
|
Yeast tRNAHis guanylyltransferase: Kinetic investigation of nucleotide addition by a 3'-5' polymerase |
Jane E.Jackman |
| 76 | Brian Smith
|
Kinetic analysis of 3'-5' nucleotide addition catalyzed by eukaryotic tRNAHis guanylyltransferase |
Jane Jackman |
| 49 | Lisa Lojek
|
Decapping dependant decay regulates lncRNA regulation |
Jeff Coller |
| 40 | Carrie Kovalak
|
The DEAD-box protein Dhh1 promotes decapping by monitoring translocation |
Jeff Coller |
| 16 | Jill Dembowski
|
Dissecting the role of Has1 in 60S ribosome biogenesis |
John L Woolford |
| 81 | Jason Talkish
|
Four ribosome assembly factors are required to fold and structure ITS2 in Saccharomyces cerevisiae |
John L. Woolford |
| 37 | Prasanth Kannanganattu
|
Role of SR splicing factors in nuclear speckle organization and gene expression |
Kannanganattu V. Prasanth |
| 71 | Samantha Sanford
|
Utilizing PNAs to target telomeric RNA regions of Plasmodium falciparum |
Kausik Chakrabarti |
| 22 | Will Foran
|
Developing an in silico pipeline for sequence analysis of small RNAs in human pathogens |
Kausik Chakrabarti |
| 77 | Jenna Smith
|
Characterization of the mRNP unique to substrates of the nonsense-mediated mRNA decay pathway |
Kristian Baker |
| 34 | Fran Jodelka
|
Identification of novel regulators of SMN2 exon 7 splicing in spinal muscular atrophy |
Michelle L Hastings |
| 31 | Mallory Havens
|
Biogenesis of Mammalian microRNAs by a Non-Canonical Processing Pathway |
Michelle L. Hastings |
| 32 | Anthony Hinrich
|
Title not published online |
Michelle L. Hastings |
| 38 | Emil Khisamutdinov
|
WebFR3D: A web application for finding, annotating, and analyzing new and recurrent RNA 3D motifs |
Neocles B. Leontis |
| 79 | Krishna Chaitanya Suddala
|
Title not published online |
Nils G. Walter |
| 35 | Matthew Kahlscheuer
|
The development of methods for the site-specific labeling of spliceosomal proteins for use in single-molecule studies |
Nils Walter |
| 26 | Kirk Gaston
|
Title not published online |
Patrick A. Limbach |
| 24 | Lihua Fu
|
Title not published online |
Patrick A. Limbach |
| 13 | Romel Dator
|
Characterizing ribosome biogenesis and assembly using mass spectrometry |
Patrick A. Limbach |
| 44 | Siwei Li
|
A new method for sequencing ribonucleic acids (RNAs) using isotope labeling and LC-MS/MS |
Patrick A. Limbach |
| 88 | Collin Wetzel
|
Targeted LC-MS/MS Identification of tRNA Through the Detection of Unique Transitions |
Patrick Limbach |
| 74 | Shraddha Sharma
|
How does Anti-TRAP regulate TRAP in the B.subtilis trp operon? |
Paul Gollnick |
| 47 | Sheng Liu
|
Biophysical studies of RNA binding by the ACB domain of human lysyl aminoacyl tRNA synthetase |
Pearl Tsang |
| 14 | Aaron Decker
|
Segmental isotopic protein labeling approach to study Protein-RNA interactions via NMR |
Pearl Tsang |
| 83 | Pallavi Thaplyal
|
Title not published online |
Philip Bevilacqua |
| 41 | Chun Kwok
|
Title not published online |
Philip Bevilacqua |
| 3 | Peter Breen
|
Title not published online |
Philip Bevilacqua |
| 1 | Amarpreet Ahluwalia
|
Title not published online |
Philip C. Bevilacqua |
| 4 | Jingyi Cao
|
Cell-type Specific Alternative Polyadenylation in Arabidopsis Roots |
Q. Quinn Li |
| 46 | Man Liu
|
Lateral Root Development Associated with a Polyadenylation Factor in Arabidopsis |
Qingshun Quinn Li |
| 91 | Denghui Xing
|
Polyadenylation Factor PCFS4 Physically Interacts With the Loci of a Subset of Genes Involved in Arabidopsis Development |
Quinn Li |
| 6 | Cai Chen
|
Comparison of insertional RNA editing in Myxomycetes |
Ralf Bundschuh |
| 29 | Lalith Gunawardane
|
Analysis of the “interactome” of a long non-coding RNA |
Saba Valadkhan |
| 52 | Mahshid Malakootian
|
A long non-coding RNA is upregulated in cancer and mediates resistance to apoptosis |
Saba Valadkhan |
| 92 | Bing Zhang
|
A large non coding RNA is involved in the cellular stress response |
Saba Valadkhan |
| 90 | Christopher Wostenberg
|
dsRBDs: the workhorse of the miRNA maturation pathway |
Scott A. Showalter |
| 66 | Kaycee Quarles
|
Pri-miRNAs: the imperfect targets of the “microprocessor” |
Scott A. Showalter |
| 61 | Eduardo Paredes
|
A universal initiator for co- and post-transcriptional RNA labeling and conjugation |
Subha R. Das |
| 28 | Debasish Grahacharya
|
Solid-phase synthesis of natural and unnatural branched RNA sequences |
Subha R. Das |
| 23 | Alysa Frank
|
How expression of antibiotic resistance genes is triggered in bacteria: a structural study of the ykkCD tetracycline-responsive riboswitch RNA |
Timea Gerczei |
| 82 | Trinh Tat
|
Investigating the non-canonical polyadenylation machinery in D. melanogaster S2 cells |
Timothy Nilsen |
| 45 | Liang-Chun Liu
|
Identification of tRNA elements important for antitermination in the glyQS T box gene |
Tina M. Henkin |
