| 123 | Aaron Robart
|
Structural Insights into RNA Splicing |
Aaron Robart |
| 3 | Nikolay Aleksashin
|
Processing of Ribo-T rRNA ends. |
Alexander Mankin |
| 95 | Sezen Meydan
|
Programmed frameshifting generates a copper transporter and a copper chaperone from the same gene |
Alexander Mankin |
| 91 | James Marks
|
Context Specific Action of Linezolid and Chloramphenicol |
Alexander Mankin |
| 39 | Tanja Florin
|
Proline-rich antimicrobial peptide Apidaecin exhibits a unique mode of inhibition of translation |
Alexander Mankin |
| 154 | Daniel Totten
|
Antagonistic splicing factors hnRNP A1 and SRSF2 compete for binding to snRNA 7SK |
Andrea Berman |
| 1 | Hiba Al-Ashtal
|
Investigating the RNA-binding properties of the Larp1 La-Module |
Andrea Berman |
| 79 | Roni Lahr
|
LARP1 on TOP: molecular recognition of the 5’TOP motif by LARP1 |
Andrea Berman |
| 94 | Phillip McCown
|
Oncogenic effects of unprocessed microRNAs |
Andrea Kasinski |
| 66 | Supriya Jindal
|
The role of eukaryotic ribosomal protein uS9 (S16) in translation |
Anton Komar |
| 61 | Amra Ismail
|
Investigation of IRES-mediated Translation of PUMA mRNA, Initiation Factor Requirements and Search for IRES-Trans Acting Factors (ITAFs) |
Anton Komar |
| 24 | Manohar Chakrabarti
|
A genome-wide alternative polyadenylation and gene expression analysis provides molecular insights into the abiotic stress response in sorghum |
Arthur Hunt |
| 49 | Guijie Hao
|
Alternative Polyadenylation as a Potential Mechanism Responding to Drought Stress in Arabidopsis thaliana |
Arthur Hunt |
| 144 | Ashley Stevens
|
Alternative polyadenylation in apicomplexans |
Arthur Hunt |
| 30 | Laura de Lorenzo
|
Genome-wide analysis of alternative polyadenylation landscapes modulated during plant-pathogen interactions in Arabidopsis thaliana |
Arthur Hunt |
| 97 | Chaitali Misra
|
Title not published online |
Auinash Kalsotra |
| 7 | Waqar Arif
|
HEPATOCYTE-SPECIFIC DELETION OF A SPLICING REGULATORY PROTEIN CAUSES SPONTANEOUS AND SEVERE NONALCOHOLIC STEATOHEPATITIS IN MICE |
Auinash Kalsotra |
| 131 | Joe Seimetz
|
Translational control of cardiac hypertrophy: Poly(A) binding protein C1 at the heart of it |
Auinash Kalsotra |
| 13 | Amruta Bhate
|
Activation of early postnatal splicing program by ESRP2 is essential for liver regeneration. |
Auinash Kalsotra |
| 145 | Congliang Sun
|
Probing the UV-induced effects on RNA and RNA-modifications by LC-MS |
Balasubrahmanyam Addepalli |
| 96 | Aamir Mir
|
Revisiting the catalytic mechanism of the hammerhead ribozyme |
Barbara Golden |
| 82 | Jeff Levengood
|
Physiochemical insights into an intrinsically disordered domain of hnRNP A1 |
Blanton Tolbert |
| 63 | Niyati Jain
|
Rules of RNA Specificity of hnRNP A1 Revealed by Global and Quantitative Analysis of its Affinity Distribution |
Blanton Tolbert |
| 134 | Shraddha Sharma
|
Identification of APOBEC3A as an RNA editing enzyme |
Bora E. Baysal |
| 37 | Cole Emanuelson
|
Orthogonal Strand Displacement and Translation Control Using Chimeric γPNA |
Bruce Armitage |
| 59 | Joseph Iacona
|
miR-146a directly regulates expression of 5-lipoxygenase activating protein (FLAP) in lung cancer cells |
Carol Lutz |
| 100 | Nick Monteleone
|
Title not published online |
Carol Lutz |
| 162 | Neil White
|
The relationship between conformational dynamics and catalysis in the lead-dependent ribozyme |
Charles Hoogstraten |
| 72 | Bett Kimutai
|
Studies of RNA nucleoside platination and destabilization of glycosidic bond |
Christine Chow |
| 89 | Prabuddha Madubashitha
|
A study of aminoglycosides binding to 16S rRNA |
Christine Chow |
| 152 | Supuni Thalalla Gamage
|
Carbohydrate-linked cisplatin analogue: reactivity studies with RNA and DNA |
Christine Chow |
| 104 | Nisansala Muthunayake
|
Invivo expression of helix 69 binding peptides in bacteria |
Christine Chow |
| 84 | Zhitao Liang
|
Alternative RNA splicing accompanies loss of ELL2 in mouse B cells |
Christine Milcarek |
| 46 | Andrew Giltmier
|
Title not published online |
Dan Schoenberg |
| 31 | Daniel del Valle-Morales
|
Impact of Fhit on lung cancer linked mRNAs |
Dan Schoenberg |
| 74 | Daniel L Kiss
|
The relationship of mRNA 5’ ends generated by cap homeostasis to translation |
Dan Schoenberg |
| 148 | David Symer
|
Title not published online |
David Symer |
| 29 | Daniel Comiskey
|
A novel mouse model of rhabdomyosarcoma underscores the dichotomy of splice variant MDM2-ALT1 function in vivo |
Dawn Chandler |
| 128 | Brianne Sanford
|
Title not published online |
Dawn Chandler |
| 101 | Matias Montes
|
Splicing factors SRSF1 and SRSF2 regulation of MDM2 alternative splicing is conserved in mice and humans |
Dawn Chandler |
| 142 | Ashlee Smith
|
Title not published online |
Dawn Chandler |
| 52 | Wilnelly Hernandez-Sanchez
|
Inhibition of telomerase by new purine analogs |
Derek Taylor |
| 169 | Mengyuan Xu
|
Investigation of multiple binding properties of POT1-TPP1 proteins in telomere ssDNA protection |
Derek Taylor |
| 73 | Laura Kirby
|
Trypanosoma brucei utilizes dual-coding genes through RNA editing |
Donna Koslowsky |
| 174 | Leah Zagore
|
Title not published online |
Donny Licatalosi |
| 38 | Caleb Embree
|
Title not published online |
Douglas Bernstein |
| 21 | Jessica Bush
|
Synthesis and Characterization of Nucleic Acid Aptamers Targeted at Aspergillus Surface Carbohydrates |
Dr. Christopher Rohlman |
| 157 | Jyotsna Vinayak
|
Human La binds poly(A) to promote cap-independent translation |
Dr. Mark Bayfield |
| 172 | Xuan Ye
|
Processive RNA degradation by the exonuclease Pop2p |
Eckhard Jankowsky |
| 8 | Armend Axhemi
|
Functional and structural basis for selective substrate binding by the exonuclease Rrp6p |
Eckhard Jankowsky |
| 151 | Frank Tedeschi
|
The RNA Helicase Ded1p prevents translation initiation from near-cognate codons |
Eckhard Jankowsky |
| 28 | Sara Cloutier
|
High resolution mapping and dynamic visualization of R-loops |
Elizabeth Tran |
| 80 | Yu-Hsuan Karen Lai
|
Characterizing the role of the DEAD-box protein Dbp2 in RNA 3’ end processing |
Elizabeth Tran |
| 11 | Zachary Beck
|
Using high-throughput microscopy coupled with machine learning to decipher regulatory pathways for the RNA helicase Dbp2 |
Elizabeth Tran |
| 70 | Emil Khisamutdinov
|
Fine-tunable Nucleic Acid nano-Scaffolds Designed from Flexible Tetra-U Helix Linking Module |
Emil Khisamutdinov |
| 20 | My Bui
|
Versatile RNA Tetra-U Helix Linking Motif as a Toolkit for Nucleic Acid Nanotechnology |
Emil Khisamutdinov |
| 117 | Alexis Plaga
|
Regulation of cross talk between Wnt/Beta-catenin and AR pathways in Prostate cancer progression |
Girish Shukla |
| 112 | Maitri Patel
|
Sequential and dynamic RNA:RNA base-pairing interactions between U6atac and U12 snRNAs predicted to form Helix 1a and Helix 1b |
Girish Shukla |
| 36 | Jey Sabith Ebron
|
Title not published online |
Girish Shukla |
| 141 | Savita Singh
|
Regulation of androgen receptor function and tumor suppressive role of miR-149-5p in prostate cancer. |
Girish Shukla |
| 140 | Jagjit Singh
|
RNA-protein interaction in the U12-dependent spliceosome |
Girish Shukla |
| 44 | Pooja Gangras
|
EJC core protein Rbm8a is critical for muscular and neural development in zebrafish |
Guramrit Singh |
| 166 | Lauren Woodward
|
Exploring role of non-canonical exon junction complexes in human nonsense-mediated mRNA decay |
Guramrit Singh |
| 107 | Eimile Oakes
|
ADAR3 Inhibits RNA Editing at the Q/R site of GRIA2 Transcripts Though Direct Binding |
Heather Hundley |
| 120 | Suba Rajendren
|
Regulation of RNA editing by C. elegans ADR-1 |
Heather Hundley |
| 156 | Pranathi Vadlamani
|
Determining the regulatory role of C. elegans ADR-2 on neural gene expression |
Heather Hundley |
| 2 | Haider Al-Awadi
|
Determining the Role of ADR-1 as a Key Cofactor in RNA Editing. |
Heather Hundley |
| 48 | Anna H. N. Griffis
|
Medicago truncatula LINC complexes and their potential role in root symbioses |
Iris Meier |
| 23 | Susan Campbell
|
Title not published online |
Ivelitza Garcia |
| 60 | Zachary Iezzi
|
Title not published online |
Ivelitza Garcia |
| 51 | Shelby Hemker
|
Hypoxic induction of c-Myc and microRNAs to inhibit nephron progenitor differentiation |
Jacqueline Ho |
| 76 | Aiswarya Krishnamohan
|
Mechanistic features of the tRNA m1G9 SPOUT methyltransferase, Trm10 |
Jane Jackman |
| 57 | Nathan Howell
|
Cellular adaptation using the m1G9 tRNA modification and its catalyst, Trm10 |
Jane Jackman |
| 33 | Samantha Dodbele
|
The Emerging Landscape of Small, Noncoding RNA Processing |
Jane Jackman |
| 58 | Abigail Hubacher
|
Exploring the role of tRNA modifications in cytotoxicity of the anti-cancer drug 5-fluorouracil |
Jane Jackman |
| 111 | Krishna Patel
|
Title not published online |
Jane Jackman |
| 98 | Nicholas Mitchell
|
Non-canonical 5'-end maturation pathways in Caenorhabditis elegans |
Jane Jackman |
| 93 | Ashanti Matlock
|
Understanding substrate specificity of tRNAHis guanylyltransferase (Thg1) |
Jane Jackman |
| 4 | Najwa Alhusaini
|
Codon optimality impacts translation rate |
Jeff Coller |
| 92 | Sophie Martin
|
Title not published online |
Jeff Coller |
| 85 | Yizhu Lin
|
Structural analyses of human and mouse NEAT1 lncRNAs suggest long-range RNA interactions contribute to paraspeckle architecture |
Joel McManus |
| 143 | Pieter Spealman
|
Comparative translatomics reveals a class of conserved, stress responsive, non-canonical uORFs |
Joel McManus |
| 135 | Chobee Sheets
|
Computational molecular docking of T box antitermination model with aminoglycosides |
John Means |
| 14 | Stephanie Biedka
|
Three major remodeling events within assembling ribosomes are required for irreversible removal of a pre-rRNA spacer sequence |
John Woolford |
| 81 | Amber LaPeruta
|
Construction and inspection of the polypeptide exit tunnel in the yeast 60S ribosomal subunit |
John Woolford |
| 56 | Jillian Houtz
|
Assessment of candidate factors required for RNA editing in Physarum polycephalum mitochondria |
Jonatha Gott |
| 47 | Mina Griffioen
|
Investigating regulation of eukaryotic gene expression by programmed -1 ribosomal frameshifting |
Jonathan Dinman |
| 69 | Yousuf Khan
|
A programmed ribosomal frameshifting defect potentiates the transforming activity of the JAK2-V617F mutation |
Jonathan Dinman |
| 137 | Gabriel Silveira dAlmeida
|
Overcoming a “molecular ruler” mechanism: the unusual heterotrimeric tRNA splicing endonuclease of Trypanosoma brucei |
Juan Alfonzo |
| 68 | Alan Kessler
|
Title not published online |
Juan Alfonzo |
| 53 | A. Elizabeth Hildreth
|
Identifying the regulatory role of the DNA entry-exit site of the nucleosome in transcription termination |
Karen Arndt |
| 34 | Alice Duchon
|
Mechanism of Human Lysyl-tRNA Synthetase/tRNALys Primer Recruitment and Packaging into HIV-1 |
Karin Musier-Forsyth |
| 22 | Jun-Kyu Byun
|
Role of Unique C-terminal Domain in an Aminoacyl-tRNA Trans-editing Protein from Arabidopsis thaliana |
Karin Musier-Forsyth |
| 65 | Danni Jin
|
Interaction between Human Glutamyl-Prolyl Aminoacyl-tRNA Synthetase Linker Domain and HIV-1 Matrix: Implications for HIV-1 Infectivity |
Karin Musier-Forsyth |
| 86 | Shuohui Liu
|
Capsid and SP1 domains of HIV-1 Gag contribute to genomic RNA binding selectivity |
Karin Musier-Forsyth |
| 77 | Lexie Kuzmishin
|
Function of a putative trans-editing factor, ProXp-x, in Rhodopseudomonas palustris |
Karin Musier-Forsyth |
| 125 | Ioulia Rouzina
|
Title not published online |
Karin Musier-Forsyth |
| 75 | Jonathan Kitzrow
|
Regulation of HIV-1 genomic RNA 5’-UTR conformation |
Karin Musier-Forsyth |
| 129 | Samantha Sanford
|
Telomerase Regulation in Pathogenic Protozoa |
Kausik Chakrabarti |
| 26 | Sarah Choudury
|
Investigating How Repressive Chromatin Modification Is Initiated at Transposons |
Keith Slotkin |
| 32 | Kim Delaney
|
Characterization of a putative R2 retrotransposon in the vertebrates Lampetra aepyptera and Lethenteron appendix. |
Kim Delaney |
| 109 | Mi Seul Park
|
Structural clues about the mechanism of RISC assembly |
Kotaro Nakanishi |
| 133 | Lucas Serdar
|
ATP hydrolysis by UPF1 promotes translation termination at premature stop codons |
Kristian Baker |
| 163 | DaJuan Whiteside
|
Analysis of the RNA binding specificity of UPF1, the core protein involved in targeting aberrant mRNA to nonsense-mediated mRNA decay |
Kristian Baker |
| 106 | Sarah Nock
|
Insight into the requirements for UPF1 association with translating mRNA |
Kristian Baker |
| 173 | Lanqing Ying
|
Epistasis analysis of 16S rRNA ram mutations helps define the conformational dynamics of the ribosome that influence decoding |
Kurt Fredrick |
| 126 | Bappaditya Roy
|
Role of the unique anticodon stem of initiator tRNA-fMet in start codon selection |
Kurt Fredrick |
| 42 | Kyle Friend
|
Investigating ribosome processivity |
Kyle Friend |
| 138 | Rachel Simpson
|
High Throughput Sequencing of Partially Edited RNAs Provides Insight into the Roles of the TbRGG2 Subcomplex Proteins in Trypanosome RNA editing. |
Laurie Read |
| 167 | Sharon Wu
|
Gamma Peptide Nucleic Acids as a Platform for Orthogonal Nucleic Acid Recognition Codes |
Ly Danith |
| 160 | Ashley Wang
|
Gamma Peptide Nucleic Acids as a Platform for Orthogonal Nucleic Acid Recognition Codes |
Ly Danith |
| 35 | Nichole Dyer
|
Mass spectrometryanalysis of the Paf1 Complex in rtr1 yeast |
Lynn Bedard |
| 176 | Kun Zhou
|
Regulatory Mechanisms of tRNA Fragments in Ovarian Cancer Cells |
Lynne Bemis |
| 15 | Abigail Bieker
|
Title not published online |
Mallory Havens |
| 118 | Elizabeth Przekwas
|
Title not published online |
Mallory Havens |
| 88 | Xiao Ma
|
STRUCTURAL basis for selectivity by aminoacyl-tRNA trans-editing factors |
Mark Foster |
| 108 | Kayla Orr
|
The effect of 5-Methyl Cytosine on Duplex Stability |
Marty Serra |
| 110 | Luke Parks
|
Fluorescent microscopy of transcription factories by BrU and EdU labeled foci |
Mats Ljungman |
| 113 | Eric Patrick
|
The eukaryotic RNA helicase Mtr4p is a duplex-sensing translocase |
Matt Comstock |
| 27 | Cho-Ying Chuang
|
Multi-color high-resolution fleezers development and measurement of RNA polymerase transcription |
Matt Comstock |
| 158 | Thomas Vornheder
|
The use of fission yeast to study the roles of eukaryotic tRNA modifications |
Michael Guy |
| 177 | Julia Ziebro
|
Identification of a conserved motif required for Trm732 function in eukaryotes |
Michael Guy |
| 67 | Paul Kelly
|
Title not published online |
Michael Ibba |
| 165 | Anne Witzky
|
5-amino-pentanolylated elongation factor P influences cellular differentiation in Bacillus subtilis |
Michael Ibba |
| 161 | Jacqueline Ward
|
Repression of LINE-1 retrotransposition through cooperation of Condensin II and GAIT complexes in epithelial cells |
Michelle S. Longworth |
| 130 | Natalie Schleper
|
The study of pseudouridine modification in U5 snRNA loop 1 |
Mina Sumita |
| 18 | Hailey Bowen
|
Using SELEX to Identify Aptamers That Bind To E. coli for Biosensor Development |
Mina Sumita |
| 6 | Sri Appasamy
|
Improved Non-Redundant datasets for RNA 3D Structure Annotation and Data Integration Pipeline to support RNA Science |
Neocles Leontis |
| 55 | Maryam Hosseini
|
RNA evolution in an oxidizing Environment: The mammalian mitochondrial ribosome |
Neocles Leontis |
| 127 | Poorna Roy
|
Automated detection and classification of RNA-protein interactions |
Neocles Leontis |
| 119 | Victoria Rai
|
Transcription Regulation using CRISPR/Cas9 |
Nils Walter |
| 64 | Ameya Jalihal
|
Microscopically visible P-bodies contribute little to miRNA-mediated gene silencing |
Nils Walter |
| 114 | Mellie June Paulines
|
Differential mass spectrometry analysis of transfer RNA by stable isotope labelling |
Pat Limbach |
| 17 | Kayla Borland
|
Azido Modified NTP as chemical handles for multiplex analysis of tRNA digestion products |
Pat Limbach |
| 175 | Ruoxia Zhao
|
Detection of Post-Transcriptional RNA Modifications in the Radioresistant Bacterium Deinococcus radiodurans R1 |
Pat Limbach |
| 16 | Rachel Boldt
|
Characterization of U5NU Binding by Vaccinia Capping Enzyme |
Paul Gollnick |
| 149 | Courtney Szyjka
|
Suppression screen for the identification of protein interactors of the trp RNA-binding attenuation protein (TRAP) |
Paul Gollnick |
| 171 | Pearlly Yan
|
Title not published online |
Pearlly Yan |
| 83 | Hui Li
|
Controllable self-assembly of molecularly defined RNA tetrahedrons for cancer targeting and therapeutics delivery |
Peixuan Guo |
| 168 | Congcong Xu
|
Title not published online |
Peixuan Guo |
| 124 | Caitlin Rodriguez
|
RAN translation and upstream open reading frame usage shift with neuronal differentiation to modulate downstream protein production |
Peter K. Todd |
| 99 | David Mitchell III
|
A genome-wide investigation of light intensity effects on the maize RNA structurome |
Phil Bevilacqua |
| 170 | Ryota Yamagami
|
Title not published online |
Phil Bevilacqua |
| 132 | Dan Seith
|
Title not published online |
Phil Bevilacqua |
| 62 | Mahdieh Jadaliha
|
Title not published online |
Prasanth Kannanganattu |
| 146 | Qinyu Sun
|
Title not published online |
Prasanth Kannanganattu |
| 139 | Deepak Singh
|
Title not published online |
Prasanth Kannanganattu |
| 50 | Qinyu Hao
|
Title not published online |
Prasanth Kannanganattu |
| 45 | Omid Gholamalamdari
|
lincNXT1 modulates basal-like breast cancer invasiveness through regulating the expression of THBD |
Prasanth Kannanganattu |
| 150 | Aamira Tariq
|
Title not published online |
Prasanth Kannanganattu |
| 10 | Marina Barriocanal
|
Several IFN-induced long noncoding RNAs regulate the antiviral response |
Puri Fortes |
| 25 | Edric Choi
|
Structural studies on the Salmonella enterica htrA RNA thermometer using SHAPE analysis |
Rachel Mitton-Fry |
| 105 | Yen Anh Nguyen
|
Monitoring htrA RNA thermometer activity using a β-galactosidase assay in Escherichia coli |
Rachel Mitton-Fry |
| 102 | Blythe Moreland
|
Applications of 5’-end sequence analysis of small RNA: Nucleotide addition by Thg1/BtTLP and TSS annotations in S. cerevisiae |
Ralf Bundschuh |
| 136 | Catharine Shipps
|
Determining the dominant secondary structures of a RNA molecule during contranscriptional folding dynamics by grouping similar dominant structures. |
Ralf Bundschuh |
| 71 | Jackson Killian
|
A tool for fusion detector post-analysis coverage visualization of chimeric RNA-seq data |
Ralf Bundschuh |
| 159 | Logan Walker
|
Using patient-derived data to customize smRNA-seq databases |
Ralf Bundschuh |
| 41 | David Frankhouser
|
MetaComb: Meta-Transcriptomic Alignment with a Combined Genome |
Ralf Bundschuh |
| 54 | James Hiznay
|
Further characterization of the roles of DDX41, a DEAD-box RNA helicase, in blood cancer and the spliceosome |
Richard Padgett |
| 90 | Mohammad Marhabaie
|
Identifying mRNA Targets of Nanos in Drosophila melanogaster |
Robin Wharton |
| 87 | Xiaozhuo Liu
|
Regulation of the translation by eukaryotic translation initiation factor 4B |
Sarah E. Walker |
| 43 | Thomas Gallagher
|
Delineating Rbfox-regulated splicing networks critical for vertebrate muscle development |
Sharon Amacher |
| 153 | Kiel Tietz
|
Pnrc2 regulates 3’UTR-mediated decay of cyclic transcripts during somitogenesis |
Sharon Amacher |
| 103 | Zachary Morrow
|
Exploring the function of Cdc5l during zebrafish segmentation |
Sharon Amacher |
| 9 | Sumirtha Balaratnam
|
G-quadruplex driven functional modulation in the human piwiinteracting RNAs |
Soumitra Basu |
| 115 | John Pettersson
|
Single-molecule analysis of backbone branched RNAs and lariat debranching enzyme |
Subha R. Das |
| 122 | Chad Ratterman
|
Analysis of the Branchpoint Residue in Backbone Branched RNAs |
Subha R. Das |
| 19 | Kara Braunreiter
|
Title not published online |
Susan Cole |
| 121 | Udumbara Rathnayake
|
Novel protein that optimizes tRNA aminoacylation in Helicobacter pylori |
Tamara Hendrickson |
| 78 | Volition La
|
Fluorescence Enhancing Aptamers in Biosensing Applications |
Thorsten Dieckmann |
| 116 | Kyle Piccolo
|
Structural analysis of the sulforhodamine B binding aptamer (SRB-2) |
Thorsten Dieckmann |
| 5 | Mike Allen
|
An investigation into the regulation of metK (SAM synthetase): an atypical S-box family member |
Tina Henkin |
| 12 | Divyaa Bhagdikar
|
Identification and characterization of S-box riboswitches that regulate at the level of translation initiation |
Tina Henkin |
| 40 | Janie Frandsen
|
Title not published online |
Tina Henkin |
| 164 | Rebecca Williams-Wagner
|
Title not published online |
Tina Henkin |
| 155 | Michael Usewick
|
Functional Programmed -1 Ribosomal Frameshifting signals in the mRNA encoding human NSD1 may regulate histone methylation and transcription |
Vivek Advani |
| 147 | Isabella Swafford
|
Programmed -1 Ribosomal Frameshifting may in part modulate miRNA function and mRNA deadenylation |
Vivek Advani |
| 178 | Sara Zimmer
|
Deep analysis of tails on Trypanosoma brucei mitochondrial transcripts reveals life stage as well as transcript-specific regulation |
Zimmer Sara |
