Poster abstracts

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Number Presenter Title PI
2Jawad Abid
Human trans-editing enzyme displays tRNA acceptor stem specificity and relaxed amino acid selectivity Karin Musier-Forsyth
35Monika Franco
5-methyluridine modifications in mRNA codons impact protein synthesis by the ribosome Kristin Koutmou
104Derek Wang
A computational pipeline for RNA 8-oxoguanine accumulation caused by oxidative stress
79Marta Rachwalak
A key to understanding RNA’s interactome: photocleavable probes for spatiotemporal control of RNA Anna M. Kietrys
20Victor Corral
A phosphorylation circuitry of RNaseH1 regulates R-loop homeostasis Hai Dang Nguyen
94Brittany Stawicki
A Transcriptome Wide Study to Elucidate co-Translational and Translation-independent mRNA Decay Kinetics Eckhard Jankowsky
82Rebecca Rasmussen
A Zinc-Responsive Ribosomal Protein Regulation Mechanism in E. coli Julius Lucks
41Caleb Gooden
Alternative polyadenylation of transcripts encoding trans-acting siRNAs in red clover
101Melissa Tosiano
Alternative transcription start sites (aTSS): a mechanism for post-transcriptional regulation of C. albicans filamentation
97Yu-Ci Syu
Analysis of HTLV-1 Gag interactome and characterization of its chaperone activity Karin Musier-Forsyth
60Eviania Likos
Androgen Receptor messenger RNA Metabolism
116Teresa Zimmerman
Antimicrobial Peptides that Target RNA: Applied in a Flexible Laboratory Curriculum for Educating Interdisciplinary Scientists Christine Chow
69Alan Mlotkowski
Calculations of theoretical pKa values for modified nucleobases Christine Chow
84Guido Rossi
Characterization of lipoprotein-bound microRNAs Pamela Pennington
44Ian Hall
Characterization of putative SAM-I riboswitches of L. monocytogenes Sarah Keane
89Deepak Shrestha
Chemical tools to incorporate a trimethyl guanosine cap onto model RNAs and to study oxidative damage to RNA Christine Chow
62Haiyun Liu
Coacervate rescue of nucleic acid enzyme activity damaged by UV
34Peter Forstmeier
Computational discovery of novel functional RNAs in SARS-CoV-2
66Ananya Mahapatra
Deducing the role of ADR-2 in immune gene regulation in C. elegans Heather Hundley
59Xin Li
Deploy RNA G1-G4 dendrimers self-assembled from motifs for drug sheltering with controllable layer-by-layer release Peixuan Guo
51Brandon Iwaniec
Determining the role of the 3’-5’ reverse polymerase in Myxococcus xanthus
110Meng Xu
Development of tools for TERRA imaging Huaiying Zhang
13Hannah Boesger
Drug Discovery Studies Targeting the Stem Loop 2 Motif in SARS-CoV-2 RNA
18Sandip Chorghade
Dynamic expression of poly(A) binding protein N1 coordinates cardiac growth during development and disease
112Haoyun Yang
Dynamics of RNA Conformational Sampling by the SMK box riboswitch Mark Foster
105Benjamin Warner
Effects of an alternative rRNA helix on 30S subunit biogenesis. Kurt Fredrick
99Konrad Thorner
ELeFHAnt: An automated tool for harmonization and annotation of single cell RNA-seq data Aaron Zorn
71Matias Montes
Elucidating the mechanisms of regulation for MDM2 alternative splicing
9Sushant Bangru
ESRP2–microRNA-122 axis directs the postnatal onset of liver maturation and polyploidization. Auinash Kalsotra
45Cooper Halliday
Establishing the presence of hidden breaks in the chloroplast rRNA of various plants Laura Ritchey
6Anna Anders
Expanding native IM-MS into the transcriptome Brandon T. Ruotolo
95Nishanti Sudhakar
Experimental approaches to identify novel RNAs with tertiary structure Phil Bevilacqua
15David Bushhouse
Expression platform features tune functional characteristics of the Clostridium beijerincki ZTP riboswitch Julius Lucks
87MaKenzie Scarpitti
FMRP inhibits translation elongation independent of G-quadruplexes Michael Kearse
10Maxwell Bannister
Functional characterization and therapeutic opportunities of RNA splicing factor mutants in myelodysplastic syndromes Dr. Hai Dang Nguyen
42Samantha Grecco
Gene-specific Pulldown for targeted in vivo RNA structure probing
70Mohamed Rushdhi Mohamed Rauff
GSK3α plays a vital role in male fertility by regulating m6A levels in testis
103Akila Venkataramany
Heat restores full-length SMN transcripts: promise for splice-augmenting therapies in SMA
54Pavana Khan
Highly specific, multiplexed isothermal pathogen detection with fluorescent aptamer readout Aaron E Engelhart
67Sarah Matatov
Human patient derived iPSCs as a system for studying cardiac dysfunctions in Myotonic Dystrophy type 1
65Justin Mabin
Human spliceosomal snRNA sequence variants generate variant spliceosomes David Brow and Peter Lewis
26Michay Diez
iCodon: Harnessing mRNA stability to customize gene expression Ariel Bazzini
14Isobel Bowles
Identification of a tRNA-specific function for the tRNA methyltransferase Trm10 in Saccharomyces cerevisiae Jane Jackman
53Theodore Lemuel Joseph Mathuram
Identification of human homologue of mtDNA encoded retrograde signaling molecule, mmu-mito-ncR805
72David Morgan
Identifying novel m6A binding proteins using a peptide as a bait which was enriched in a phage display experiment.
108Sydney Willey
Title not published online Li-Chun Tu
83Nick Reiter
Impact of RNA structure on histone lysine specific demethylase 1 (LSD1) activity and nucleosome engagement. Reiter Nicholas
76Eliza Oser
Title not published online
21Justin Davis
Insights into RNA-protein interactions in Trypanosoma brucei telomerase Kausik Chakrabarti
33Emily Erdmann
Investigating an ADAR-dependent germline phenotype in 𝘊𝘢𝘦𝘯𝘰𝘳𝘩𝘢𝘣𝘥𝘪𝘵𝘪𝘴 𝘦𝘭𝘦𝘨𝘢𝘯𝘴 Heather Hundley
85Paul Russell
Investigating how upstream open reading frame length regulates re-initiation and mRNA stability Michael Kearse
7Rene Arvola
Investigating Regulators of Nonsense Mediated mRNA Decay in Zebrafish Neuromuscular Development Guramrit Singh
8Taylor Ayers
Investigating the epitranscriptome of the early embryo
27Daisy DiVita
Investigating the inhibitory role of initiation factor eIF2A on translation in vitro Michael Kearse
32Caleb Embree
Investigating the role of EFTUD2 in pre-mRNA splicing and EJC deposition Guramrit Singh
100Elizabeth Liz Tidwell
Investigation of RNA 3D structure & small molecule interaction by a multidisciplinary approach Markos Koutmos
63Yaping Liu
Investigation of structural switch that regulates pre-miR-92a processing by NMR Sarah Keane
31Ashutosh Dubey
KREH1 helicase activity promotes the occurrence and proper positioning of mRNA editing initiation in Trypanosoma brucei
73Priyanka Mukherjee
Long noncoding RNAs are abundant targets of ADAR3 in glioblastoma Heather Hundley
114Zhongxia Yi
Mammalian UPF3A and UPF3B activate NMD independently of their EJC binding
68Chaitali Misra
Title not published online
46Victor Hernandez
Modulating RNA Splicing of DNA Topoisomerase IIα in Human Leukemia K562 Cells: Use of CRISPR/Cas9 Gene Editing to Impact Sensitivity/Resistance to the Anticancer Agent Etoposide Jack Yalowich
111Boyoon Yang
Molecular mechanisms that mediate A-to-I RNA editing in vivo Heather Hundley
23Zac Dewald
Myotonic Dystrophy Type 1 Adversely Alters the Adult Hepatocellular Transcriptome
115Lichun Zhou
Natural variation in the plant polyadenylation complex
38Guoming Gao
Probing the impact of HOPS on RNAs with single molecule tracking Nils Walter
75Sarah Nock
Proximity labeling to monitor in vivo protein dynamics during nonsense-mediated mRNA decay
61Chenyu Lin
Pum3 as a molecular player in transcriptional termination and R-Loop-Associated DNA Damage Wayne Miles
81Swetha Rajasekaran
Pumilio regulates Dicer1 protein and miRNA levels in human cells Wayne Miles
86Manu Sanjeev
PYM controls Exon Junction Complex occupancy at non-canonical positions
58Weicheng Li
Quantitative modeling of ligand-binding thermodynamics in the cyclic RNA-binding oligomeric protein TRAP Mark Foster
11Daniel Binzel
Rational Design for Controlled Release of Dicer Substrate siRNA Harbored in phi29 Based RNA Nanoparticles Peixuan Guo
92Katherine Sortino
RESC8 and RESC14 cooperate to mediate RESC function and dynamics during trypanosome RNA editing
52Malithi Jayasinghe
Reverse (3'-5') RNA polymerases: Applications beyond tRNA(His) maturation Jane Jackman
90Jalal Siddiqui
Title not published online Wayne Miles
25Taylor Dickson
RNA G-quadruplex behavior and observation of liquid-liquid phase separation under biologically relevant conditions.
36Sean Frisbie
RNA Pseudoknot Structure in 16S Helix 18 Destabilizes the Binding and Enzymatic Activity of Ribosomal RNA Modification Enzyme RsuA
50Md Ismail Hossain
RNA Thermometer Thermal Stability Modulated by pH-Sensitive Molecular Switching Jennifer Hines
28Taylor Dodson
Robust methods to isolate, identify, and quantify tRNA modifications in prokaryotic and eukaryotic models
24Alfa Dhakal
Role of ADR-1 in the pathogen response of C. elegans Heather Hundley
22Sam Desind
Role of the long non-coding RNA PACER in regulation of COX-2 gene expression Carol Lutz
93Sarah Starcovic
Screening of Group IIC Intron IEP Tags for RNP Kinetic Studies Aaron Robart
64Xiao Ma
Selectivity mechanisms of an aminoacyl-tRNA trans-editing factor Mark Foster
47Laura Hertz
Strand Invasion during the Fluoride Riboswitch Cotranscriptional Folding Pathway Julius Lucks
49Kathryn Holzmacher
Stress-Induced Increase in Small ncRNAs Generated from Regulatory Regions of the Mitochondrial Genome Anna BlumentalPerry
30Chen Du
Structural and functional characterization of Hfq C-terminal domain using native mass spectrometry
107Catherine Wilhelm
Structural and kinetic studies of a minimal protein-only RNase P
96Egor Syroegin
Structural basis for the context-specific action of classic peptidyl transferase inhibitors Yury Polikanov
56Thao Linh Le
Study of Trm7 interactions with binding partners Trm732 and Trm734 for 2’-O-methylation of the tRNA anticodon loop in yeast Michael Guy
16Chih-Wei Chen
Synergistic properties of ribosome-targeting macrolides and hygromycin A Yury Polikanov
5Basma Al Masraf
TCAB1 is necessary for telomerase RNP assembly Jens Schmidt
55Daniel L Kiss
The democratization of RNA therapeutics Daniel Kiss
1Sudeshi Abedeera
The h18pep1 inhibit RsuA binding to 16S rRNA
109Jiansong Xu
The NiCo riboswitch as an iron-responsive riboswitch: a new mechanism of bacterial iron regulation Joseph Cotruvo
40Olga Golubeva
The novel role of m6A-mRNA binding protein YTHDF1 in the regulation of heart function
39David Goich
The p38 MAPK Hog1 remodels the translatome of the fungal pathogen Cryptococcus neoformans. John Panepinto
91You Jin Song
The role of a nuclear-enriched long non-coding RNA in hypoxia response and cancer progression Prasanth Kannanganattu
102Megan Van Horn
The role of circular RNA in Parkinson’s disease etiology Anna M. Kietrys
113Soon Yi
Towards quantitative measurements of global RNA-protein binding patterns in cells. Eckhard Jankowsky
74Aldrex Munsayac
Towards structural characterization of RNA-only complexes via small-angle scattering techniques Sarah Keane
29Zihan Dong
Towards Understanding of the Role of Circular RNAs circ5615 and circCcnb1 in Cancerogenesis Anna M. Kietrys
80Reshma Raghava Kurup
Transcriptome-wide analysis of ADAR3 binding and regulation of ADAR1 editing activity in glioblastoma cells Heather Hundley
43Lydia Grmai
Translation reinitiation regulates oocyte maturation
19Katie Clark
tRNA family-specific turnover pathways and environmental stresses regulate tRNA intron degradation
4Christina Akirtava
Unraveling the roles of 5’ transcript leaders in gene regulation Joel McManus
3Hannah Ackerman
Title not published online
12Anton Blatnik
Using SMN mutants to determine what functions SMN performs and which are critical to SMA Arthur H.M. Burghes
57Jeff Levengood
Utilization of high-pressure NMR for the study of the folded and disordered domains of hnRNP A1 Blanton Tolbert