| 1 | Jibin Abraham Punnoose
|
Single-molecule quantification of individual base-stacking energies using a Centrifuge Force Microscope |
Ken Halvorsen |
| 2 | Rabab Abu Alhasan
|
Investigating the role of UPF3 factors in the rearrangement and function of premature translation termination complex |
Guramrit Singh |
| 3 | Oluwafolajimi Adesanya
|
DM1 CUG repeat expression alters cardiac mitochondrial respiration and dynamics |
Auinash Kalsotra |
| 4 | Alexander Ahn
|
Alternative RNA Splicing in Skeletal Muscle from Exercise, Rapamycin, and Aging. |
Andrew Ludlow |
| 5 | Nida Ajmal
|
Developing high throughput assay for studying beta cell function and Type 1 Diabetes drug discovery |
Craig S. Nunemaker |
| 6 | Miriam Akhnoukh
|
Title not published online |
Prasanth Kannanganattu |
| 7 | Oluwasegun Akinniyi
|
Unexpected cytoplasmic functions of the RNAPII degradation factor, Def1 |
Joseph Reese |
| 8 | Madison Allegretti
|
Investigating molecular interactions with 3’-5’ RNA polymerases in Dictyostelium Discoideum discoideum |
Jane Jackman |
| 9 | Siddik Alom
|
Title not published online |
Kurt Fredrick |
| 10 | Mary Brintha Croos Anburaj
|
Impact of guanine oxidation on RNA structure and function |
Soumitra Basu |
| 11 | Grace Arhin
|
Identification of compounds targeting NPSL2 - a regulatory element in the oncomiR-1 RNA: A combined STD-NMR and molecular modelling approach |
Sarah Keane |
| 13 | Ava Artz
|
Title not published online |
Mallory Havens |
| 14 | Nicholas Baker
|
Title not published online |
Auinash Kalsotra |
| 15 | Hamza Balci
|
Single Molecule Investigations of Telomere Accessibility and Protection by Shelterin |
Hamza Balci |
| 16 | Madhanagopal Barathraj
|
Switchback DNA: A double helix with a difference |
Dr. Arun Richard Chandrasekaran |
| 17 | Dina Bayachou
|
Investigating the effect of phosphomimetic mutations of SARS-CoV-2 nucleocapsid protein on viral RNA binding |
Karin Musier-Forsyth |
| 18 | Dana Beseiso
|
Investigating functional Transcription Start Site (TSS) switching in breast cancer |
Rachel Niederer |
| 19 | Shivang Bhaskar
|
Effect of nucleolar stress on the localization of SNUL-1 ncRNA |
Prasanth Kannanganattu |
| 20 | Danielle Bingman
|
Title not published online |
Ralf Bundschuh |
| 21 | Anton Blatnik
|
Sm-mRNP: Sm-protein rings can assemble on more than snRNAs |
Arthur HM Burghes |
| 22 | Anna Blumental-Perry
|
MtDNA Encoded Non-coding RNA, mito-ncR-LDL805, Relocates to the Nucleus and Increases Mitochondrial Bioenergetics |
Anna Blumental-Perry |
| 23 | Isobel Bowles
|
A tRNA Specific Function for tRNA Methyltransferase Trm10 is associated with a new tRNA quality control mechanism in Saccharomyces cerevisiae |
Jane Jackman |
| 24 | Christina Budding
|
Site-specific identification and role of m6A RNA modification in HIV-1 genomic RNA 5'UTR |
Karin Musier-Forsyth |
| 25 | Nicole Burbach
|
Synthesis of fluorescent C-nucleoside: 2-aminopyridine |
Mina Sumita |
| 26 | Arun Richard Chandrasekaran
|
Title not published online |
Arun Richard Chandrasekaran |
| 27 | Ronghao Chen
|
The RNA-binding protein, PUM1, directly binds to and promotes the protein levels of PD-L1 in cancer cells. |
Wayne Miles |
| 28 | Sandip Chorghade
|
Postnatal Silencing of Nuclear Poly(A) Binding Protein (PABPN1) Regulates Cardiac Gene Expression and Function |
Auinash Kalsotra |
| 29 | Amelia Cochran
|
Investigation of Pus4 Substrate Selection |
Markos Koutmos |
| 30 | Zhengmin Cong
|
MANCR modulates breast cancer metastasis by influencing Net1a expression in cis |
Prasanth Kannanganattu |
| 31 | Victor Corral
|
Title not published online |
Hai Dang Nguyen |
| 32 | Allan Victor Cortes
|
Title not published online |
Mallory Havens |
| 33 | Natalie Creech
|
Determining the role of the tRNA methyltransferase Trm7:Trm734 in repression of TY1 elements in yeast |
Michael Guy |
| 34 | Caylee Cunningham
|
Characterization of the s2m G15U mutation associated with the SARS-CoV-2 Delta variant |
MihaelaRita Mihailescu |
| 35 | Liuhan Dai
|
Ultrafast, high-accuracy disease biomarker detection through fluorogenic single molecule recognition |
Nils Walter |
| 36 | Ruwani Madushika Dalath
|
Imaging lncRNA TERRA with fluorescent γPNA probes |
Huaiying Zhang |
| 37 | Diptatanu Das
|
Altered splicing program leads to functionally aberrant liver secretome during alcoholic liver disease |
Auinash Kalsotra |
| 38 | Subhadeep Das
|
Unraveling the Role of DDX5 in Small Cell Lung Cancer |
Elizabeth Tran |
| 39 | Saurja DasGupta
|
RNA assembly in an RNA World |
Jack Szostak |
| 41 | Ashton Davey
|
Bioinformatics approach for the identification of a box C/D guide RNA responsible for the Nm39 modification of tRNA |
Michael Guy |
| 42 | Trupti Devale
|
Role of stress granules in dsDNA activated Stimulator of Interferon Genes (STING) signaling pathway |
Malathi Krishnamurthy |
| 43 | Jacob Devos
|
RNA-based iron sensing: The czcD riboswitch and associated protein in Listeria monocytogenes |
Joey Cotruvo |
| 169 | Zac Dewald
|
Myotonic Dystrophy type 1 alters ACC1 function and induces liver lipid accumulation |
Auinash Kalsotra |
| 44 | Elise Dunshee
|
Functional dissection of intrinsically disordered N-terminal regions of human Pumilio proteins that repress gene expression |
Aaron Goldstrohm |
| 45 | Catherine Edgington
|
Assessing tRNA substrate specificity of archaeal homologs of the conserved tRNA methyltransferase Trm10 |
Jane Jackman |
| 46 | Caleb Embree
|
Loss of Function of Activated Spliceosome Components Reduces Nonsense Mediated mRNA Decay Efficiency |
Guramrit Singh |
| 47 | Cristina Espinosa-Diez
|
Regulatory role of the lncRNA CASC15 in vascular remodeling and its implications for chronic kidney disease |
Cristina Espinosa-Diez |
| 48 | Emma Eubank
|
Title not published online |
Philip Smaldino |
| 49 | Caleb Frye
|
Host MicroRNA Interactions with the SARS-CoV-2 Viral Genome 3'-Untranslated Region |
MihaelaRita Mihailescu |
| 50 | Rachel Giles
|
Guanosine mRNA modifications impact translation speed |
Kristin Koutmou |
| 51 | Madeline Glennon
|
Title not published online |
Jessica Brown |
| 52 | Keerthi Gottipati
|
Structural Basis of Nuclear Export of HIV-1 RNA Mediated by the Rev Response Element |
Kay Choi |
| 53 | Lydia Grimaldi
|
The interactions between hnRNP K mRNA and miR-1249-3P are mediated by a non-canonical G-quadruplex structure |
MihaelaRita Mihailescu |
| 54 | Brittany Hamilton
|
Stability of circularized chromosomes lacking telomeres in Saccharomyces cerevisiae |
Melissa Mefford |
| 55 | Benjamin Hanson
|
Unraveling Cellular Consequences of SF3B1 mutations in Myelodysplastic Syndromes |
Hai Dang Nguyen |
| 56 | Humna Hasan
|
Understanding role of RNAs localized into extracellular vesicles and pathways of their selective export |
Dr. Andrea Kasinski |
| 57 | Mohammed Hassan
|
RNA nanoparticles for enhancement of ocular drug delivery |
Pat Limbach |
| 58 | Jackson Hastings
|
Identification of tRNA export adaptors in Saccharomyces cerevisiae |
Anita Hopper |
| 59 | Hannah Hayth
|
Bioconjugation of functionalized oligodeoxynucleotides to fluorescence reporters |
Emil Khisamutdinov |
| 168 | Joseph Hazel
|
Regulation of tryptophan biosynthesis through the interaction of the trp¬ RNA-binding attenuation protein (TRAP) and its inhibitor Anti-TRAP |
Mark Foster |
| 60 | Noah Helton
|
Analysis of stress-induced gene regulation by stress granules |
Stephanie Moon |
| 61 | Audrey Hoelscher
|
The role of YHR020W 5’ UTR isoforms in stress tolerance |
Rachel Niederer |
| 62 | Kira Holton
|
Cellular Context for mRNA Substrate Selection by Pseudouridine Synthase 7 (PUS7) |
Chase Weidmann |
| 63 | Keontre Hughes
|
Improved high-resolution optical fleezers methods for investigating human telomerase |
Matthew J. Comstock |
| 64 | Sun Jeong Im
|
Title not published online |
Christine Chow |
| 65 | Brandon Iwaniec
|
Identifying substrates of the 3’-5’ reverse polymerase in Myxococcus xanthus |
Jane Jackman |
| 66 | Whitney Jimenez
|
MDM2 alternative splicing is post-transcriptionally regulated by miRNA-29b: A novel pathway of MDM2 regulation |
Dawn Chandler |
| 67 | Grace Johnecheck
|
Substrate Recognition by Two 3′ to 5′ RNA Polymerases in Dictyostelium discoideum |
Jane Jackman |
| 68 | Mohammad Lutful Kabir
|
Exploring the Interplay of G-Quadruplexes and CRISPR/dCas9 in Gene Expression Regulation |
Soumitra Basu |
| 69 | Manju Kasaju
|
The Effect of a G-Quadruplex Structure in the Oct4 3’-Untranslated Region (UTR) on its Binding Interactions with miR-145-5p |
MihaelaRita Mihailescu |
| 70 | Isaiah Kaufman
|
Translation efficiency and evolution of the Kozak consensus sequence: What can Ribo-seq teach us? |
Polly Hsu |
| 71 | Vikas Kaushik
|
mTORC2 phosphorylation induces configurational changes in IMP1 resulting in modulation of RNA recognition |
Edwin Antony |
| 72 | Anees Mohammed Keedakkatt Puthenpeedikak
|
Refinement of the Amber Force Field For RNA: Improving the Description of Non-Bonded Interactions |
David Mathews |
| 73 | Reuben Kern
|
Potential Functional Roles of Self-cleaving Ribozymes in Oryza sativa (Rice) |
Phil Bevilacqua |
| 74 | Eshan Khan
|
Title not published online |
Wayne Miles |
| 75 | Misbah Khan
|
Post-Transcriptional Regulation of Nuclear Encoded Mitochondrial Genes by Pumilio Proteins. |
Wayne Miles |
| 76 | Benjamin Killam
|
Title not published online |
Yury Polikanov |
| 77 | Jeongjin Kim
|
Discovery and characterization of a novel telomerase alternative splicing isoform that protects lung cancer cells from chemotherapy induced cell death |
Andrew Ludlow |
| 78 | Woo Joong Kim
|
Characterizing the impact of bulge nucleotide mutation on htrA thermometer |
Rachel Mitton-Fry |
| 79 | John Kipp
|
Regulation of PD-L1 expression through antisense oligonucleotide treatment. |
Dawn Chandler |
| 80 | Kobie Kirven
|
SPARCS: A Modular, Containerized, and Scalable Pipeline for Genome-Wide RiboSNitch Prediction |
Phil Bevilacqua |
| 81 | Sineth G Kodikara
|
Detecting secondary structure formation with FRET-PAINT |
Hamza Balci |
| 82 | Ganesh Koshre
|
Title not published online |
Wayne Miles |
| 83 | Shardul Kulkarni
|
Characterizing the function of the human CCR4-NOT complex using rapid degron systems. |
Joseph Reese |
| 84 | Zac LaRocca-Stravalle
|
The Dichotomy of MDM2 Splicing Regulation under Genotoxic Stress |
Dawn Chandler |
| 85 | Kayla Lenshoek
|
Title not published online |
Chase Weidmann |
| 86 | Lauren Levesque
|
Role of nTr-25, a tRNA-Arg-UCU isodecoder, in establishment of left-right asymmetry in mammals |
Cole Susan |
| 87 | Minxue Liu
|
Monoallelically-expressed Noncoding RNAs form nucleolar territories on NOR-containing chromosomes and regulate rRNA expression |
Prasanth Kannanganattu |
| 88 | Riley Luebbers
|
Deregulation of eIF6 in high grade invasive cancers |
Sofia Origanti |
| 89 | Gowthami Mahendran
|
Title not published online |
Jessica Brown |
| 90 | Thulasi Mahendran
|
Selective mRNA oxidation of the electron transport chain complex subunits in human neuronal cells dysregulate energy production in Multiple Sclerosis |
Soumitra Basu |
| 91 | Nisha Makkar
|
Investigating biological significance of tRNA acetyltransferase Tan1, methyltransferase Trm1, and pseudouridine synthase Pus1 tRNA substrates in Saccharomyces cerevisiae |
Jane Jackman |
| 92 | Cesar Martinez
|
Precise mapping of translation initiation sites using the bacterial toxin RelE |
Rachel Niederer |
| 93 | Alexander Mckeeken
|
Title not published online |
Hai Dang Nguyen |
| 94 | Matthew McMahon
|
R-loop accumulation induced by RNA splicing perturbation triggers a discrete PARP2 response |
Hai Dang Nguyen |
| 95 | Matt McPherson
|
Studies to determine if tRNA retrograde nuclear import is an iterative process |
Anita Hopper |
| 96 | Jeff Medley
|
Regulation of miRNA Strand Selection in Caenorhabditis elegans |
Anna Zinovyeva |
| 97 | Arya Menon
|
Title not published online |
Stephanie Moon |
| 98 | Jagannath Misra
|
Title not published online |
Ronald C. Wek |
| 99 | Fawwaz Naeem
|
Analysis of programmed frameshifting during translation of prfB in Flavobacterium johnsoniae |
Kurt Fredrick |
| 100 | Subhashis Natua
|
Temporal Control of Dynamic PABPN1 Expression Governs Cardiac Maturation and Adult Cardiac Function |
Auinash Kalsotra |
| 101 | Sarah Nock
|
Yeast engineered for enhanced identification of protein interaction networks using in vivo Proximity Labeling |
Kristian Baker |
| 102 | Fnu Palwasha
|
Type 1 Diabetes therapeutic compound MSB-61: using RNA sequencing to identify the mechanism |
Craig S. Nunemaker |
| 103 | Madhura Paranjpe
|
Insights into the molecular mechanism of translation inhibition by the ribosome-targeting antibiotic thermorubin |
Yury Polikanov |
| 104 | Leeann Parsi
|
Biophysical Characterization of a G-Quadruplex Structure in the Sox2 mRNA 3’ UTR: Implications for Cancer |
MihaelaRita Mihailescu |
| 105 | Benjamin Pastore
|
Pre-piRNA trimming prevents piRNAs from being erroneously targeted by RNA dependent RNA polymerase |
Wen Tang |
| 106 | Jiaqi Pei
|
Coacervates serve as protocytoplasm to help protect prebiotic RNA from hydrolysis under wet-dry cycling conditions |
Christine Keating |
| 107 | Noa Perry
|
Nuclear Level of mtDNA Encoded Non-Coding RNA Regulates Mitochondrial Bioenergetics |
Anna Blumental-Perry |
| 108 | Lydia Phillips
|
Modeling the Effect of Nucleotide Variations on Secondary and Tertiary Structures |
Joel McManus |
| 109 | Yury Polikanov
|
Structural basis of Cfr-mediated antimicrobial resistance and mechanisms for its evasion |
Yury Polikanov |
| 110 | Katelynn Pranger
|
Synthesis of 2’F-Modified RNA Aptamers |
Emil Khisamutdinov |
| 111 | Ian Price
|
Title not published online |
Wen Tang |
| 112 | Ishita Purwar
|
TGF-ß signaling mediates downregulation of ESRP2 in alcoholic liver disease hepatocytes |
Auinash Kalsotra |
| 113 | Kylie Raasch
|
Large-scale synthesis of pseudouridine using an immobilized enzyme |
Mina Sumita |
| 114 | Rafia Rahat
|
Stabilizing antisense oligos for therapeutic delivery by extracellular vesicles for the treatment of pediatric cancers |
Dawn Chandler |
| 115 | Sandeepani Ranaweera
|
Genome-wide effects of NusA and NusG on intrinsic termination in Escherichia coli |
Paul Babitzke |
| 116 | Imalka W Rathnayaka-Mudiyanselage
|
Interplay between 5’ nucleotide modifications and BR-body formation in bacterial mRNA decay |
Stephanie Moon |
| 117 | Austin Rockaitis
|
Using an Electrochemical Deblocking Step in ASO Synthesis to Produce Quicker and Higher Yields of Oligonucleotides |
Mallory Havens |
| 118 | Arlin Rodriguez
|
Self-Assembly of DNA Nanostructures in Different Cations |
Chandrasekaran Arun |
| 119 | Ernesto Roldan-Bonet
|
Genome-wide application of a tRNA assay to uncover proteins involved in the tRNA retrograde pathway |
Anita Hopper |
| 120 | Poonam Roshan
|
Modulating ribosomal subunit-association dynamics to stall cancer growth |
Sofia Origanti |
| 121 | Antara Roy
|
The role of ribosomal protein L13a-dependent GAIT pathway regulates macrophage polarization during bone marrow differentiation. |
Barsanjit Mazumder |
| 122 | Paul Russell
|
Deciphering mechanisms of ribosome turnover during global inhibition of translation elongation in mammalian cells |
Michael Kearse |
| 123 | Ezra Samson
|
ATXN3 exon 10 skipping as a potential therapeutic for SCA3 |
Mallory Havens |
| 124 | Neel Sangani
|
Transcriptome wide high throughput mapping of protein RNA occupancy profiles using POP seq |
Sarath Chandra Janga |
| 125 | Md Sharear Saon
|
Roles for Charged and Tautomeric Nucleobases in RNA Structure |
Phil Bevilacqua |
| 126 | Andrew Savidge
|
Clinical de novo Argonaute mutations change the trajectory of the miRNA guide and lead to the production of 10-18 nt RNAs |
Kotaro Nakanishi |
| 127 | Emeline Scott
|
Generation of pug1, pug1met2, met2 in C. albicans assessing pseudouridine degradation |
Doug Bernstein |
| 128 | Kasun Senanayake
|
Step-By-Step Binding and Unwinding Of RNA By A Ded1p Triplet Revealed By Combined High-Resolution Tweezers And Fluorescence Measurements |
Matthew J. Comstock |
| 129 | James Seuch
|
Title not published online |
David Mathews |
| 130 | Sajad Shiekh
|
Title not published online |
Hamza Balci |
| 131 | Krishna Shivakumar
|
Locked Nucleic Acid Oligonucleotides Facilitate RNA•LNA-RNA Triple Helix Formation and Reduce MALAT1 Levels |
Jessica Brown |
| 132 | GeunYoung Sim
|
Title not published online |
Kotaro Nakanishi |
| 133 | Kaley Simcox
|
Quantitative mapping of modified RNA nucleosides in tRNAs |
Kristin Koutmou |
| 134 | Paolo Sinopoli
|
tRNA introns act as novel noncoding regulatory RNAs |
Anita Hopper |
| 135 | Laura Snyder
|
RNA modifications impact the rate of RNA synthesis by the SARS-CoV-2 replication and transcription complex |
Kristin Koutmou |
| 136 | Sahiti Somalraju
|
Identification of polyA tails in human cell lines using nanopore sequencing |
Sarath Chandra Janga |
| 137 | Eiman Stiffler
|
Exploring the versatility of the MTR1 ribozyme |
Rachel Mitton-Fry |
| 138 | Mara Stout
|
The role of topoisomerases in circularized chromosome strains of Saccharomyces cerevisiae |
Melissa Mefford |
| 139 | Megan Sullivan
|
Probing the impact of SARS-CoV-2 nucleocapsid protein phosphorylation on its aggregation and RNA chaperone activities |
Karin Musier-Forsyth |
| 140 | Egor Syroegin
|
Nascent peptide mediated displacement of macrolides from translating ribosome |
Yury Polikanov |
| 141 | Yu-Ci Syu
|
Identification of specific tRNA-Pro isodecoder used by HTLV-1 to prime reverse transcription and role of host factors in chaperoning primer annealing |
Karin Musier-Forsyth |
| 142 | Hannah Talbot
|
Encoding, Decoding, and Rendering Information in DNA Nanoswitch Libraries |
Arun Richard Chandrasekaran |
| 143 | Jingxuan Tang
|
Neurodegenerative VCP Mutant and Wild type Co-assembly and Stoichiometry Assessment by Single Molecule Assays |
Nils Walter |
| 144 | Elizabeth Liz Tidwell
|
High throughput screening of small molecule binding partners for the FMN riboswitch by a multidisciplinary approach |
Markos Koutmos |
| 145 | Iranna Todkari
|
Resolving altered base-pairing of RNA modifications with DNA nanoswitches |
Dr. Ken Halvorsen |
| 146 | Melissa Tosiano
|
Edc3p is not required for P-Body condensation, heat tolerance, or hyphal phenotype in diverse Candida albicans strains |
Joel McManus |
| 147 | Dmitrii Travin
|
Manikomycin inhibits prokaryotic translation by targeting the E site of the large ribosomal subunit. |
Alexander Mankin |
| 148 | Rachel Trebesch
|
Role of RNA Structure in Gene Regulation by sRNAs |
Dr. Janie Frandsen |
| 149 | Madison Turley
|
Ribonucleoprotein Mutational Profiling of Telomerase RNA |
Jens Schmidt |
| 150 | Satenik Valesyan
|
Detection of m5C modification in E. coli tRNA sequences and the enzyme responsible for its synthesis |
Pat Limbach |
| 151 | Tommy Vo
|
Elongator complex regulates non-coding small interfering RNAs |
Tommy Vo |
| 152 | Han Wang
|
Title not published online |
Xiao Li |
| 153 | Yi-Hui Wang
|
Identification and characterization of novel proteins in the biogenesis of C. elegans PIWI-interacting RNAs |
Wen Tang |
| 154 | Benjamin Warner
|
Role of an alternative 16S rRNA helix in biogenesis of the 30S subunit |
Kurt Fredrick |
| 155 | Julia Warrick
|
Interrogating the RNA topoisomerase activity of the mRNA-binding protein TOP3B |
Michael Kearse |
| 156 | Andrew Weeks
|
Zinc-dependent regulation of sod1 mRNA transcript levels. |
Amanda Bird |
| 157 | Megan Westwood
|
Investigation of the structure of pre-miR-122 and the features that impact Dicer processing efficiency |
Sarah Keane |
| 158 | Mark Wilson
|
Global gene expression analysis in circularized chromosome strains of Saccharomyces cerevisiae |
Melissa Mefford |
| 159 | Matthew Wirick
|
FOXO/daf-16 opposes the expression of the conserved let-7 microRNA to regulate epidermal seam cell multipotency in C. elegans |
Xantha Karp |
| 160 | Teresa Wolak
|
RNA-targeting antibiotic peptides: a multi-pronged approach |
Christine Chow |
| 161 | Haoyun Yang
|
Nearest-neighbor cooperativity in the Bacillus ring-shaped trp RNA binding attenuation protein (TRAP) from protein engineering and cryo-EM |
Mark Foster |
| 162 | Clifford Yerby
|
Simultaneous binding of aminoglycosides to the ribosome could rationalize the increased bactericidal activity |
Yury Polikanov |
| 163 | Walter Zahurancik
|
The Arabidopsis tandem CCCH zinc-finger protein AtTZF1 enhances salt stress tolerance by targeting the autoinhibited Ca2+-ATPase 11 (ACA11) mRNA |
Venkat Gopalan |
| 164 | Maria Zea
|
Crosstalk between DEAD box RNA helicase Dbp2 and RNA Pol II kinetics on transcription termination |
Elizabeth Tran |
| 165 | Huaqun Zhang
|
Kinetics analysis of cityRNA-loaded human Argonaute2 and Argonaute3 |
Kotaro Nakanishi |
| 166 | Shurong Zhou
|
Engineering ADAR1-targeting Cas13d mRNA and circular guide RNA to sensitize triple-negative breast cancer for immunotherapy |
Zhu Guizhi |
| 167 | Mingyi Zhu
|
DecoyFinder: Identification of Decoy Sequences in Sets of Homologous RNA Sequences |
David H. Mathews |
